Protein–RNA interactions for Protein: A0A0B4J245

TRAV12-1, T-cell receptor alpha variable 12-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV12-1A0A0B4J245 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 SPCS2P3-201ENST00000500401 656 ntBASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 SRP68-213ENST00000629930 165 ntTSL 5 BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 AC018445.3-201ENST00000624177 1945 ntBASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 STAP2-206ENST00000600324 1508 ntAPPRIS P3 TSL 2 BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 AC087289.5-201ENST00000586076 3175 ntBASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRAV12-1A0A0B4J245 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 GRB14-201ENST00000263915 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 FXYD7-204ENST00000588265 636 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 MAP1LC3A-201ENST00000360668 1574 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 EGFL8-219ENST00000333845 1310 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 BID-204ENST00000399767 2129 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 SPOCK3-215ENST00000510741 1963 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRAV12-1A0A0B4J245 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV12-1A0A0B4J245 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV12-1A0A0B4J245 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV12-1A0A0B4J245 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV12-1A0A0B4J245 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV12-1A0A0B4J245 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRAV12-1A0A0B4J245 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-1A0A0B4J245 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-1A0A0B4J245 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-1A0A0B4J245 MFSD7-202ENST00000347950 1599 ntTSL 2 BASIC14.83□□□□□ -0.04
TRAV12-1A0A0B4J245 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-1A0A0B4J245 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRAV12-1A0A0B4J245 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV12-1A0A0B4J245 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
TRAV12-1A0A0B4J245 C7orf49-213ENST00000617987 1727 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV12-1A0A0B4J245 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC14.83□□□□□ -0.04
TRAV12-1A0A0B4J245 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 NAE1-204ENST00000394074 1654 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 ASB1-202ENST00000409297 878 ntTSL 5 BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 TRA2A-201ENST00000297071 1845 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
TRAV12-1A0A0B4J245 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 CXCL16-201ENST00000293778 2222 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 FAM217A-201ENST00000274673 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 UGP2-201ENST00000337130 2338 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
TRAV12-1A0A0B4J245 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 237.5 ms