Protein–RNA interactions for Protein: A0A0B4J241

TRAV13-1, T-cell receptor alpha variable 13-1 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-1A0A0B4J241 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 POLD2-218ENST00000610533 1619 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
TRAV13-1A0A0B4J241 MESP2-201ENST00000341735 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 FUBP3-201ENST00000319725 3124 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 FAM47E-201ENST00000424749 1484 ntAPPRIS P3 TSL 5 BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
TRAV13-1A0A0B4J241 PLPP1-201ENST00000264775 1550 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 AC026471.6-201ENST00000622954 1905 ntBASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 USP45-205ENST00000472914 1617 ntTSL 5 BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 AC136475.3-202ENST00000534742 812 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 KCTD13-207ENST00000568000 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 TMUB1-201ENST00000297533 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 AL157384.1-201ENST00000445995 2473 ntBASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
TRAV13-1A0A0B4J241 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 PCP4L1-201ENST00000504449 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 EI24-211ENST00000534546 1544 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 LSM4-201ENST00000252816 986 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 AC241377.3-202ENST00000626088 1088 ntBASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 PRMT5-228ENST00000627278 129 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 AC241585.3-202ENST00000628937 1088 ntBASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 AC245100.8-202ENST00000629247 1058 ntBASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
TRAV13-1A0A0B4J241 AC133637.1-201ENST00000624115 1537 ntBASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 SAXO1-201ENST00000380530 1727 ntAPPRIS ALT2 TSL 2 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 SHMT1-203ENST00000354098 1656 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 GMPPB-202ENST00000308388 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 ST3GAL4-213ENST00000530591 1459 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 OIP5-AS1-208ENST00000560706 473 ntTSL 5 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
TRAV13-1A0A0B4J241 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms