Protein–RNA interactions for Protein: A0A087WT01

TRAV27, T-cell receptor alpha variable 27 (Fragment), humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV27A0A087WT01 AC133561.4-201ENST00000566112 224 ntBASIC19.15■□□□□ 0.66
TRAV27A0A087WT01 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV27A0A087WT01 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV27A0A087WT01 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV27A0A087WT01 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV27A0A087WT01 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
TRAV27A0A087WT01 RELL2-205ENST00000518856 1419 ntTSL 5 BASIC19.15■□□□□ 0.66
TRAV27A0A087WT01 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.15■□□□□ 0.66
TRAV27A0A087WT01 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
TRAV27A0A087WT01 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.15■□□□□ 0.66
TRAV27A0A087WT01 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
TRAV27A0A087WT01 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.14■□□□□ 0.66
TRAV27A0A087WT01 KLC2-207ENST00000421552 2721 ntTSL 5 BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 TESC-201ENST00000335209 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 INS-202ENST00000381330 597 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 AC068580.1-201ENST00000446489 252 ntTSL 3 BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
TRAV27A0A087WT01 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 SEC22C-207ENST00000423701 1458 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 MAFF-204ENST00000426621 2216 ntAPPRIS P1 TSL 4 BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 ENTPD6-203ENST00000376652 2750 ntAPPRIS P3 TSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
TRAV27A0A087WT01 CADPS-202ENST00000357948 5190 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 DUSP9-201ENST00000342782 2433 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 IL20RA-202ENST00000367746 1244 ntTSL 2 BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 LRRC75A-AS1-202ENST00000470491 1057 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 IGHV3-19-201ENST00000521488 291 ntBASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 C12orf43-208ENST00000539736 1033 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 AC008764.7-201ENST00000593779 1081 ntBASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
TRAV27A0A087WT01 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 PLD6-201ENST00000321560 2560 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 AC008406.3-201ENST00000620001 1374 ntBASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 TUSC3-209ENST00000509380 1266 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 LINC01011-201ENST00000445000 2811 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 HEY2-201ENST00000368364 2678 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.11■□□□□ 0.65
TRAV27A0A087WT01 PALM-207ENST00000590161 2137 ntTSL 4 BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 ALG9-215ENST00000616540 2069 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 AC096631.2-201ENST00000436136 790 ntBASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 ZXDC-201ENST00000336332 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC19.1■□□□□ 0.65
TRAV27A0A087WT01 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.1■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms