Protein–RNA interactions for Protein: F8WFD2

NPIPA3, Nuclear pore complex-interacting protein family member A3, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA3F8WFD2 EFCAB12-204ENST00000505956 2154 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 ATP1A3-201ENST00000302102 3597 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 LINC00589-201ENST00000506121 1404 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AC002519.1-201ENST00000570073 2792 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 LINC01278-204ENST00000609143 2768 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 SCNN1B-201ENST00000307331 2085 ntTSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 OPRM1-203ENST00000337049 1389 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AC100803.1-201ENST00000501440 1380 ntTSL 2 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 WDR59-223ENST00000616369 1953 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 GANAB-215ENST00000534779 2626 ntAPPRIS ALT2 TSL 2 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 TNIK-206ENST00000460047 3894 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 FBXL13-203ENST00000379308 2577 ntTSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 ANAPC4-210ENST00000510092 2599 ntAPPRIS ALT1 TSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 C12orf45-206ENST00000637147 1906 ntTSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 ANP32D-201ENST00000266594 960 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 RAB13-201ENST00000368575 1176 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 C9orf64-202ENST00000376340 620 ntTSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 C22orf23-202ENST00000403026 765 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 NME6-202ENST00000415053 913 ntAPPRIS P1 TSL 3 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 Z93930.2-201ENST00000458080 505 ntTSL 3 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AC138781.1-201ENST00000501322 505 ntTSL 3 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 SNORA31.7-201ENST00000516287 135 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 MRPL57P7-201ENST00000518583 258 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 RAD51-AS1-202ENST00000526635 419 ntTSL 2 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 OR4A4P-201ENST00000532898 930 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AC134312.5-202ENST00000562705 756 ntTSL 3 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AC015688.3-201ENST00000579001 942 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 RN7SL405P-201ENST00000582502 289 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 ZNF506-206ENST00000587452 575 ntTSL 4 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AL357137.1-201ENST00000604645 203 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AC016597.1-203ENST00000610941 947 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 Metazoa_SRP.88-201ENST00000615890 269 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 LINC00976-203ENST00000630386 866 ntTSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 KRTAP9-1-203ENST00000634358 330 ntTSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AC022167.5-203ENST00000637929 398 ntTSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 DCANP1-201ENST00000503143 3135 ntAPPRIS P1 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 ELP2-201ENST00000350494 2487 ntTSL 2 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 ANKRD62-202ENST00000587848 2919 ntAPPRIS P1 TSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AARS-201ENST00000261772 3477 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 SPTBN2-211ENST00000617502 3498 ntTSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 PMS2-201ENST00000265849 2855 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 PPFIA2-227ENST00000552948 3976 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 L1CAM-201ENST00000361699 3888 ntAPPRIS ALT1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 DRGX-201ENST00000374139 2738 ntAPPRIS P1 TSL 2 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 NSUN4-204ENST00000474844 2150 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 AL031009.1-201ENST00000624137 2182 ntBASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 ZNF550-201ENST00000325134 4305 ntAPPRIS P2 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 CHAMP1-201ENST00000361283 3795 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 PALLD-201ENST00000261509 5809 ntAPPRIS P3 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 C14orf119-201ENST00000319074 3660 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 LINC01001-201ENST00000526704 2553 ntTSL 5 BASIC10.18□□□□□ -0.78
NPIPA3F8WFD2 CISD1-201ENST00000333926 2479 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 CYP1A1-209ENST00000612821 2402 ntTSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 FBXO36-203ENST00000409992 1911 ntTSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 FAM196A-203ENST00000614311 4335 ntTSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AL353611.2-201ENST00000625008 2897 ntBASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 RAB37-201ENST00000340415 3804 ntTSL 2 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 TMPRSS7-201ENST00000419127 2317 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 ZNF648-201ENST00000339948 3649 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 PIGN-202ENST00000400334 4456 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 COPS8-201ENST00000354371 4007 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 STK38-201ENST00000229812 3576 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 PPP3CB-203ENST00000394828 3119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 PITX2-213ENST00000616641 3102 ntTSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 PILRA-202ENST00000350573 1011 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 ZNF343-202ENST00000358413 771 ntTSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 INSL6-201ENST00000381641 758 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 CCDC152-202ENST00000388827 1237 ntTSL 2 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 HNRNPA1P34-201ENST00000391992 950 ntBASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AL136531.1-201ENST00000412497 480 ntTSL 3 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 ULK4-202ENST00000414606 647 ntTSL 4 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AC011247.1-204ENST00000421463 635 ntTSL 3 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 LINC01517-201ENST00000426922 980 ntTSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AP001630.1-201ENST00000428410 437 ntTSL 2 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AL355990.1-202ENST00000443008 797 ntTSL 3 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 RN7SL551P-201ENST00000480810 298 ntBASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 SLC2A10-202ENST00000486000 497 ntTSL 3 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 SCARNA20-201ENST00000516768 131 ntBASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 ANO1-AS2-201ENST00000531347 1004 ntTSL 2 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AC145350.2-202ENST00000564165 685 ntTSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 COX6B2-207ENST00000589467 479 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AC015849.1-201ENST00000605548 662 ntTSL 3 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AC027644.3-201ENST00000607978 557 ntBASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AC012594.1-251ENST00000609666 895 ntTSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 DSTYK-203ENST00000615388 1042 ntTSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 IGLV2-8-201ENST00000620395 517 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 POM121B-201ENST00000380760 2487 ntBASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 DCAF11-202ENST00000396936 2469 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 AC008575.2-202ENST00000506997 1643 ntAPPRIS P1 TSL 3 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 SEPT2-201ENST00000360051 3613 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 PPIP5K1-201ENST00000334933 5586 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 PPIP5K1-203ENST00000360135 5559 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 PPIP5K1-204ENST00000360301 5565 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 COG4-202ENST00000393612 2756 ntAPPRIS ALT2 TSL 1 (best) BASIC10.17□□□□□ -0.78
NPIPA3F8WFD2 SRRM5-201ENST00000417606 2381 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 1112.5 ms