Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 AC027020.2-201ENST00000602585 2389 ntBASIC10.18□□□□□ -0.78
P04436 CFAP43-204ENST00000369720 2876 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04436 GOLGA6L22-203ENST00000620691 3991 ntAPPRIS ALT2 TSL 5 BASIC10.18□□□□□ -0.78
P04436 AC019322.4-201ENST00000623470 3930 ntBASIC10.18□□□□□ -0.78
P04436 AL034548.1-201ENST00000608495 1672 ntBASIC10.18□□□□□ -0.78
P04436 AL645820.1-201ENST00000623445 1673 ntBASIC10.18□□□□□ -0.78
P04436 RPS15A-201ENST00000322989 2203 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04436 TRIM2-209ENST00000494872 2202 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04436 PARD3B-201ENST00000349953 3315 ntAPPRIS ALT2 TSL 1 (best) BASIC10.18□□□□□ -0.78
P04436 ZBTB34-201ENST00000319119 6564 ntTSL 1 (best) BASIC10.18□□□□□ -0.78
P04436 UQCC1-201ENST00000349714 2188 ntTSL 5 BASIC10.18□□□□□ -0.78
P04436 EPC2-203ENST00000409654 1624 ntTSL 3 BASIC10.18□□□□□ -0.78
P04436 NME6-205ENST00000421967 2004 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 PTPN2-201ENST00000309660 3467 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 MYH11-203ENST00000452625 6886 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 CACNA1G-AS1-202ENST00000505793 1433 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 ABCB9-204ENST00000392439 3791 ntAPPRIS P2 TSL 5 BASIC10.17□□□□□ -0.78
P04436 SUPT5H-203ENST00000402194 3698 ntAPPRIS ALT1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 ZKSCAN1-206ENST00000620510 9192 ntTSL 5 BASIC10.17□□□□□ -0.78
P04436 GOT1L1-201ENST00000307599 1378 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 ARPP21-213ENST00000428373 3150 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 CLCN4-202ENST00000380833 6750 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 MERTK-207ENST00000616902 3104 ntTSL 5 BASIC10.17□□□□□ -0.78
P04436 RELN-201ENST00000343529 11565 ntAPPRIS P3 TSL 5 BASIC10.17□□□□□ -0.78
P04436 RELN-202ENST00000424685 11571 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P04436 RELN-203ENST00000428762 11571 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P04436 LAMTOR1-204ENST00000538404 1346 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 GPD1-201ENST00000301149 3082 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 CEP350-202ENST00000367607 13491 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 PCDHGA4-201ENST00000571252 4778 ntAPPRIS P3 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 NWD1-201ENST00000379808 7254 ntTSL 5 BASIC10.17□□□□□ -0.78
P04436 TTTY1B-201ENST00000250776 910 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 TTTY1-201ENST00000250805 910 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 PSMB1-201ENST00000262193 928 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 FCER1A-202ENST00000368115 1165 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 TRAV3-201ENST00000390425 519 ntAPPRIS P1 BASIC10.17□□□□□ -0.78
P04436 KRTAP4-7-201ENST00000391417 992 ntAPPRIS P2 BASIC10.17□□□□□ -0.78
P04436 CLCP2-201ENST00000392050 421 ntBASIC10.17□□□□□ -0.78
P04436 RPLP0P6-201ENST00000394878 954 ntBASIC10.17□□□□□ -0.78
P04436 DAAM2-203ENST00000405961 829 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 EIF4E2-204ENST00000409322 797 ntTSL 5 BASIC10.17□□□□□ -0.78
P04436 GCNT2-205ENST00000410107 1255 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 RPSAP13-201ENST00000415189 875 ntBASIC10.17□□□□□ -0.78
P04436 HNF4GP1-201ENST00000430567 1249 ntBASIC10.17□□□□□ -0.78
P04436 AL590822.1-201ENST00000442483 326 ntTSL 3 BASIC10.17□□□□□ -0.78
P04436 NDUFA3-210ENST00000471292 646 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 RN7SL851P-201ENST00000480512 303 ntBASIC10.17□□□□□ -0.78
P04436 ANO1-AS2-201ENST00000531347 1004 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 AC090559.1-202ENST00000532943 851 ntTSL 3 BASIC10.17□□□□□ -0.78
P04436 LINC01177-201ENST00000568030 536 ntTSL 3 BASIC10.17□□□□□ -0.78
P04436 CMC2-223ENST00000570195 871 ntTSL 3 BASIC10.17□□□□□ -0.78
P04436 AC024361.1-201ENST00000572594 642 ntBASIC10.17□□□□□ -0.78
P04436 AC011518.1-201ENST00000593038 532 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 AC005261.3-201ENST00000597973 1045 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 CU633967.1-205ENST00000624368 1140 ntTSL 5 BASIC10.17□□□□□ -0.78
P04436 PIGA-209ENST00000634582 965 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 AL158212.3-201ENST00000564352 4237 ntBASIC10.17□□□□□ -0.78
P04436 NR2F1-AS1-213ENST00000607797 3380 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 ENPP5-201ENST00000230565 2544 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 NUP214-203ENST00000451030 5021 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 SCNN1B-201ENST00000307331 2085 ntTSL 5 BASIC10.17□□□□□ -0.78
P04436 FNBP1-204ENST00000446176 5393 ntAPPRIS P2 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 IER3IP1-201ENST00000256433 3689 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 HBS1L-203ENST00000367822 2793 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 CNBD2-202ENST00000373973 1956 ntAPPRIS ALT2 TSL 5 BASIC10.17□□□□□ -0.78
P04436 EIF4B-202ENST00000416762 1985 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 BX005040.3-201ENST00000611332 1988 ntTSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 JAK1-201ENST00000342505 5047 ntAPPRIS P1 TSL 5 BASIC10.17□□□□□ -0.78
P04436 CTSC-201ENST00000227266 1921 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 EFCAB6-AS1-201ENST00000431327 2656 ntTSL 2 BASIC10.17□□□□□ -0.78
P04436 AC016831.6-201ENST00000604514 1517 ntBASIC10.17□□□□□ -0.78
P04436 DIRAS1-201ENST00000323469 3424 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 AL645937.5-201ENST00000642091 1883 ntBASIC10.17□□□□□ -0.78
P04436 BHLHB9-203ENST00000447531 4031 ntAPPRIS P1 TSL 4 BASIC10.17□□□□□ -0.78
P04436 ENPEP-201ENST00000265162 6943 ntAPPRIS P1 TSL 1 (best) BASIC10.17□□□□□ -0.78
P04436 P4HA3-AS1-201ENST00000502071 2157 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 FUBP1-202ENST00000370767 2524 ntTSL 5 BASIC10.16□□□□□ -0.78
P04436 MYO5A-205ENST00000399231 12225 ntAPPRIS P3 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 MAGED1-202ENST00000375695 2875 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 ATL2-204ENST00000406122 2864 ntTSL 5 BASIC10.16□□□□□ -0.78
P04436 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC10.16□□□□□ -0.78
P04436 TMEM2-206ENST00000396272 1437 ntTSL 2 BASIC10.16□□□□□ -0.78
P04436 PDYN-203ENST00000540134 2472 ntAPPRIS P1 TSL 4 BASIC10.16□□□□□ -0.78
P04436 CDC37L1-201ENST00000381854 3502 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 AC100803.1-201ENST00000501440 1380 ntTSL 2 BASIC10.16□□□□□ -0.78
P04436 Z97206.1-201ENST00000404930 1673 ntBASIC10.16□□□□□ -0.78
P04436 EAF1-201ENST00000396842 4690 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 AC087235.1-201ENST00000538297 1329 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 AP1G2-202ENST00000397120 2609 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 CLN8-201ENST00000331222 7169 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 LZIC-202ENST00000377223 2281 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 AC093627.7-201ENST00000567533 3208 ntBASIC10.16□□□□□ -0.78
P04436 LINC00538-201ENST00000626109 1906 ntBASIC10.16□□□□□ -0.78
P04436 CSPG4P1Y-201ENST00000306641 795 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 CSPG4P2Y-201ENST00000306853 795 ntTSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 OR6B3-201ENST00000319423 996 ntAPPRIS P1 BASIC10.16□□□□□ -0.78
P04436 SYNGR4-201ENST00000344846 1000 ntAPPRIS P1 TSL 1 (best) BASIC10.16□□□□□ -0.78
P04436 OR2T1-201ENST00000366474 1110 ntBASIC10.16□□□□□ -0.78
P04436 MIR1273A-201ENST00000408826 103 ntBASIC10.16□□□□□ -0.78
P04436 RPSAP25-201ENST00000412645 883 ntBASIC10.16□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms