Protein–RNA interactions for Protein: Q9Y6A2

CYP46A1, Cholesterol 24-hydroxylase, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYP46A1Q9Y6A2 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC25.17■■□□□ 1.62
CYP46A1Q9Y6A2 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC25.17■■□□□ 1.62
CYP46A1Q9Y6A2 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC25.17■■□□□ 1.62
CYP46A1Q9Y6A2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CYP46A1Q9Y6A2 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CYP46A1Q9Y6A2 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CYP46A1Q9Y6A2 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC25.16■■□□□ 1.62
CYP46A1Q9Y6A2 AL024507.2-201ENST00000606070 2574 ntBASIC25.16■■□□□ 1.62
CYP46A1Q9Y6A2 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC25.16■■□□□ 1.62
CYP46A1Q9Y6A2 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
CYP46A1Q9Y6A2 SMURF1-201ENST00000361125 5737 ntTSL 1 (best) BASIC25.16■■□□□ 1.62
CYP46A1Q9Y6A2 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC25.16■■□□□ 1.62
CYP46A1Q9Y6A2 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC25.16■■□□□ 1.62
CYP46A1Q9Y6A2 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 MIR572-201ENST00000384983 95 ntBASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 AL139246.5-201ENST00000606645 996 ntBASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC25.15■■□□□ 1.62
CYP46A1Q9Y6A2 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 SUDS3P1-201ENST00000505831 966 ntBASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC25.14■■□□□ 1.62
CYP46A1Q9Y6A2 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC25.14■■□□□ 1.61
CYP46A1Q9Y6A2 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.61
CYP46A1Q9Y6A2 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CYP46A1Q9Y6A2 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CYP46A1Q9Y6A2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
CYP46A1Q9Y6A2 STX10-202ENST00000343587 1128 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
CYP46A1Q9Y6A2 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC25.13■■□□□ 1.61
CYP46A1Q9Y6A2 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 EBPL-204ENST00000378272 766 ntTSL 3 BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 MFF-208ENST00000409616 1247 ntTSL 5 BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 AC055733.4-201ENST00000638462 1354 ntBASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 BX005040.4-201ENST00000637145 1518 ntBASIC25.12■■□□□ 1.61
CYP46A1Q9Y6A2 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC25.11■■□□□ 1.61
CYP46A1Q9Y6A2 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CYP46A1Q9Y6A2 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC25.11■■□□□ 1.61
CYP46A1Q9Y6A2 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CYP46A1Q9Y6A2 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC25.11■■□□□ 1.61
CYP46A1Q9Y6A2 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC25.11■■□□□ 1.61
CYP46A1Q9Y6A2 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC25.11■■□□□ 1.61
CYP46A1Q9Y6A2 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CYP46A1Q9Y6A2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
CYP46A1Q9Y6A2 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 BCL11B-203ENST00000443726 2599 ntAPPRIS ALT2 TSL 5 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 RALB-208ENST00000631312 311 ntTSL 5 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 AC005224.4-201ENST00000583262 1652 ntBASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC25.1■■□□□ 1.61
CYP46A1Q9Y6A2 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
CYP46A1Q9Y6A2 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CYP46A1Q9Y6A2 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CYP46A1Q9Y6A2 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC25.09■■□□□ 1.61
CYP46A1Q9Y6A2 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CYP46A1Q9Y6A2 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
CYP46A1Q9Y6A2 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC25.09■■□□□ 1.61
CYP46A1Q9Y6A2 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC25.09■■□□□ 1.61
CYP46A1Q9Y6A2 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC25.09■■□□□ 1.61
Retrieved 100 of 98,524 protein–RNA pairs in 17.7 ms