Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 EPN1-201ENST00000085079 2355 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PCDHGB3Q9Y5G1 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 AC097381.1-201ENST00000429019 1296 ntBASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 GALNS-211ENST00000568311 703 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PCDHGB3Q9Y5G1 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 CIZ1-204ENST00000372938 2984 ntAPPRIS P3 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 PHPT1-201ENST00000247665 890 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 AES-207ENST00000586839 942 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PCDHGB3Q9Y5G1 PPP2R5E-204ENST00000555899 2164 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 RARG-201ENST00000338561 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 AC126544.1-201ENST00000580842 1059 ntBASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 TRIM14-202ENST00000342043 1479 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC20.02■□□□□ 0.8
PCDHGB3Q9Y5G1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PCDHGB3Q9Y5G1 EFS-202ENST00000351354 2704 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGB3Q9Y5G1 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGB3Q9Y5G1 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.02■□□□□ 0.79
PCDHGB3Q9Y5G1 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC20.02■□□□□ 0.79
PCDHGB3Q9Y5G1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGB3Q9Y5G1 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGB3Q9Y5G1 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
PCDHGB3Q9Y5G1 INAFM2-202ENST00000638170 3052 ntAPPRIS P1 BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 Z98882.1-201ENST00000622160 2253 ntBASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 CKLF-205ENST00000417030 628 ntAPPRIS ALT2 TSL 4 BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 SLC25A24-204ENST00000569674 2357 ntBASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC20.01■□□□□ 0.79
PCDHGB3Q9Y5G1 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 TMCC2-209ENST00000637895 1455 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 Z97653.1-201ENST00000567096 446 ntTSL 3 BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 RNF166-202ENST00000537718 1525 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20■□□□□ 0.79
PCDHGB3Q9Y5G1 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 AK1-201ENST00000223836 736 ntTSL 3 BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
PCDHGB3Q9Y5G1 PRMT2-204ENST00000397628 954 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 17.4 ms