Protein–RNA interactions for Protein: Q9Y548

YIPF1, Protein YIPF1, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF1Q9Y548 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 C9orf163-202ENST00000624034 2573 ntBASIC22.26■■□□□ 1.15
YIPF1Q9Y548 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 PLLP-204ENST00000569059 665 ntTSL 3 BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 LHFPL3-202ENST00000424859 1852 ntAPPRIS P5 TSL 1 (best) BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
YIPF1Q9Y548 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC22.25■■□□□ 1.15
YIPF1Q9Y548 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC22.25■■□□□ 1.15
YIPF1Q9Y548 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
YIPF1Q9Y548 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC22.25■■□□□ 1.15
YIPF1Q9Y548 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC22.25■■□□□ 1.15
YIPF1Q9Y548 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC22.25■■□□□ 1.15
YIPF1Q9Y548 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC22.25■■□□□ 1.15
YIPF1Q9Y548 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC22.25■■□□□ 1.15
YIPF1Q9Y548 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC22.25■■□□□ 1.15
YIPF1Q9Y548 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
YIPF1Q9Y548 TRADD-202ENST00000486556 1833 ntTSL 2 BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 KRT16P2-201ENST00000414673 1423 ntBASIC22.24■■□□□ 1.15
YIPF1Q9Y548 LSM14B-201ENST00000279068 2548 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 BET1L-204ENST00000410108 637 ntTSL 3 BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 FGF8-207ENST00000618991 856 ntTSL 3 BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC22.24■■□□□ 1.15
YIPF1Q9Y548 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 ABHD17AP1-201ENST00000358206 933 ntBASIC22.23■■□□□ 1.15
YIPF1Q9Y548 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC22.23■■□□□ 1.15
YIPF1Q9Y548 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 AC061975.6-201ENST00000579045 1553 ntBASIC22.22■■□□□ 1.15
YIPF1Q9Y548 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 MTHFS-201ENST00000258874 907 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 CD99P1-205ENST00000527459 561 ntBASIC22.22■■□□□ 1.15
YIPF1Q9Y548 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 KLF13-207ENST00000560473 489 ntTSL 3 BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 AC098934.4-201ENST00000564127 592 ntBASIC22.22■■□□□ 1.15
YIPF1Q9Y548 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 BHLHA15-202ENST00000609256 796 ntAPPRIS P1 TSL 3 BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
YIPF1Q9Y548 ME2-208ENST00000638937 2471 ntTSL 5 BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 MT3-201ENST00000200691 569 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 AC069152.1-201ENST00000438030 544 ntBASIC22.21■■□□□ 1.15
YIPF1Q9Y548 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 RBM38-203ENST00000356208 2382 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
YIPF1Q9Y548 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC22.2■■□□□ 1.15
YIPF1Q9Y548 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 BID-202ENST00000342111 854 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
YIPF1Q9Y548 RBM17P2-201ENST00000616397 1405 ntBASIC22.2■■□□□ 1.14
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms