Protein–RNA interactions for Protein: Q9Y4Z0

LSM4, U6 snRNA-associated Sm-like protein LSm4, humanhuman

Known RBP Predictions only

Length 139 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4Q9Y4Z0 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 AC241377.3-202ENST00000626088 1088 ntBASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 AC241585.3-202ENST00000628937 1088 ntBASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 AC245100.8-202ENST00000629247 1058 ntBASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 NKIRAS2-204ENST00000393880 1644 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
LSM4Q9Y4Z0 COL15A1-205ENST00000610452 5422 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 METTL21A-210ENST00000458426 1366 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 AL157384.1-201ENST00000445995 2473 ntBASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 JTB-203ENST00000368589 1216 ntTSL 2 BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 CREB3L2-203ENST00000452463 1105 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 RHOF-204ENST00000537265 699 ntTSL 2 BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 HRH3-203ENST00000611492 900 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 AC136469.2-201ENST00000623944 1028 ntBASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 AL031602.1-201ENST00000633169 911 ntBASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 AC026471.6-201ENST00000622954 1905 ntBASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 ANO8-201ENST00000159087 4152 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 MADCAM1-205ENST00000613880 1509 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
LSM4Q9Y4Z0 MFF-203ENST00000349901 1716 ntTSL 2 BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 AP006621.3-202ENST00000530083 765 ntTSL 3 BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 AC079089.2-201ENST00000531211 1277 ntBASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 UBE2Q1-201ENST00000292211 3210 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 TBX1-203ENST00000359500 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
LSM4Q9Y4Z0 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 SRM-201ENST00000376957 1266 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 PRKG2-207ENST00000628926 2623 ntTSL 2 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC16.89■□□□□ 0.29
LSM4Q9Y4Z0 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 TLX3-201ENST00000296921 1493 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 JDP2-201ENST00000267569 1700 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 C15orf61-202ENST00000557807 769 ntTSL 2 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 AC233992.3-201ENST00000607491 485 ntBASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 SCUBE1-208ENST00000615096 1119 ntTSL 2 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 MPST-208ENST00000628507 698 ntTSL 5 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 UNC93B1-201ENST00000227471 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 SOHLH1-201ENST00000298466 1987 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LSM4Q9Y4Z0 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LSM4Q9Y4Z0 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms