Protein–RNA interactions for Protein: Q9Y3P8

SIT1, Signaling threshold-regulating transmembrane adapter 1, humanhuman

Predictions only

Length 196 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIT1Q9Y3P8 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 CD99P1-203ENST00000431582 602 ntTSL 4 BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
SIT1Q9Y3P8 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 KRT16P2-201ENST00000414673 1423 ntBASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 MTFP1-203ENST00000407550 912 ntTSL 2 BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 GXYLT1P3-201ENST00000453058 1193 ntBASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 FGF8-207ENST00000618991 856 ntTSL 3 BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 MAPK14-210ENST00000622903 1003 ntTSL 5 BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 HNRNPL-201ENST00000221419 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.49■■□□□ 1.03
SIT1Q9Y3P8 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.48■■□□□ 1.03
SIT1Q9Y3P8 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC21.48■■□□□ 1.03
SIT1Q9Y3P8 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIT1Q9Y3P8 FAM210CP-201ENST00000445714 574 ntBASIC21.48■■□□□ 1.03
SIT1Q9Y3P8 RNF146-206ENST00000480444 843 ntTSL 2 BASIC21.48■■□□□ 1.03
SIT1Q9Y3P8 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIT1Q9Y3P8 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC21.48■■□□□ 1.03
SIT1Q9Y3P8 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIT1Q9Y3P8 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.48■■□□□ 1.03
SIT1Q9Y3P8 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC21.48■■□□□ 1.03
SIT1Q9Y3P8 LINC00526-201ENST00000581067 1875 ntBASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 LGALS9B-202ENST00000423676 1713 ntAPPRIS ALT2 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 RPPH1-201ENST00000516869 333 ntBASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 AC008403.3-201ENST00000598924 454 ntBASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 AC243732.1-201ENST00000612648 864 ntBASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 IGSF21-201ENST00000251296 1943 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC21.47■■□□□ 1.03
SIT1Q9Y3P8 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 FLYWCH2-202ENST00000396958 1036 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 RNF121-214ENST00000533380 870 ntTSL 3 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 REXO1L12P-201ENST00000622156 912 ntBASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 RNASET2-214ENST00000620173 1391 ntTSL 5 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 KCTD5-201ENST00000301738 2482 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 PPP1R14C-201ENST00000361131 2152 ntAPPRIS P1 TSL 1 (best) BASIC21.46■■□□□ 1.03
SIT1Q9Y3P8 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.03
SIT1Q9Y3P8 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 AC211429.1-201ENST00000415277 523 ntBASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 C1QBPP2-201ENST00000528754 825 ntBASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 AC060766.5-201ENST00000590539 871 ntBASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC21.45■■□□□ 1.02
SIT1Q9Y3P8 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC21.44■■□□□ 1.02
SIT1Q9Y3P8 FBXL8-203ENST00000518148 1054 ntTSL 2 BASIC21.44■■□□□ 1.02
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms