Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERGIC3Q9Y282 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
ERGIC3Q9Y282 PKIB-205ENST00000368452 1398 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERGIC3Q9Y282 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.3■□□□□ 0.68
ERGIC3Q9Y282 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERGIC3Q9Y282 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 SH3RF3-AS1-201ENST00000567491 1604 ntBASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 AC005703.6-201ENST00000623265 1329 ntBASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 LINC02175-201ENST00000571219 1875 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 NKX2-5-201ENST00000329198 1709 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 HSPBP1-206ENST00000587922 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 BHLHE23-202ENST00000612929 1109 ntBASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERGIC3Q9Y282 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 MYH14-206ENST00000596571 5988 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 PAOX-206ENST00000480071 1324 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 BARX2-201ENST00000281437 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERGIC3Q9Y282 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 ZFAND2B-201ENST00000289528 1314 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 DUX4L18-201ENST00000553347 1267 ntBASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 AC104564.3-201ENST00000582367 638 ntBASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERGIC3Q9Y282 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERGIC3Q9Y282 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
ERGIC3Q9Y282 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
ERGIC3Q9Y282 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 ITPKB-203ENST00000429204 6162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 TUB-201ENST00000299506 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC19.26■□□□□ 0.67
ERGIC3Q9Y282 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 TNIP1-205ENST00000518977 2200 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 FBXO31-207ENST00000618298 1871 ntTSL 5 BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 AC074183.2-201ENST00000623112 922 ntBASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 ARFRP1-210ENST00000614942 2554 ntTSL 5 BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ERGIC3Q9Y282 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC19.24■□□□□ 0.67
ERGIC3Q9Y282 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 37.6 ms