Protein–RNA interactions for Protein: Q9UPX8

SHANK2, SH3 and multiple ankyrin repeat domains protein 2, humanhuman

Predictions only

Length 1,470 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2Q9UPX8 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC31.86■■■□□ 2.69
SHANK2Q9UPX8 AC069236.1-201ENST00000604339 616 ntBASIC31.86■■■□□ 2.69
SHANK2Q9UPX8 FGF13-208ENST00000626909 1039 ntTSL 2 BASIC31.86■■■□□ 2.69
SHANK2Q9UPX8 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SHANK2Q9UPX8 MYC-209ENST00000641252 345 ntBASIC31.86■■■□□ 2.69
SHANK2Q9UPX8 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
SHANK2Q9UPX8 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC31.86■■■□□ 2.69
SHANK2Q9UPX8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC31.86■■■□□ 2.69
SHANK2Q9UPX8 AC083880.1-201ENST00000608266 535 ntBASIC31.85■■■□□ 2.69
SHANK2Q9UPX8 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC31.85■■■□□ 2.69
SHANK2Q9UPX8 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC31.85■■■□□ 2.69
SHANK2Q9UPX8 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
SHANK2Q9UPX8 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 RARG-204ENST00000543726 1779 ntTSL 2 BASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 AC003102.1-202ENST00000563394 1796 ntBASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 PPP1R14BP2-201ENST00000426284 444 ntBASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 C17orf97-203ENST00000571106 736 ntAPPRIS ALT2 TSL 2 BASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 AC068987.5-201ENST00000642069 987 ntAPPRIS P1 BASIC31.84■■■□□ 2.69
SHANK2Q9UPX8 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SHANK2Q9UPX8 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC31.83■■■□□ 2.69
SHANK2Q9UPX8 AC061975.6-201ENST00000579045 1553 ntBASIC31.83■■■□□ 2.69
SHANK2Q9UPX8 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC31.83■■■□□ 2.69
SHANK2Q9UPX8 SNHG6-203ENST00000520944 638 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SHANK2Q9UPX8 LYRM1-205ENST00000562740 931 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
SHANK2Q9UPX8 MIR4758-201ENST00000577688 71 ntBASIC31.83■■■□□ 2.69
SHANK2Q9UPX8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SHANK2Q9UPX8 C1orf174-201ENST00000361605 1666 ntAPPRIS P1 TSL 1 (best) BASIC31.83■■■□□ 2.69
SHANK2Q9UPX8 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC31.83■■■□□ 2.69
SHANK2Q9UPX8 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC31.82■■■□□ 2.69
SHANK2Q9UPX8 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC31.82■■■□□ 2.69
SHANK2Q9UPX8 CBWD6-213ENST00000613716 1820 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SHANK2Q9UPX8 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC31.82■■■□□ 2.68
SHANK2Q9UPX8 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC31.82■■■□□ 2.68
SHANK2Q9UPX8 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC31.82■■■□□ 2.68
SHANK2Q9UPX8 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
SHANK2Q9UPX8 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC31.81■■■□□ 2.68
SHANK2Q9UPX8 UHRF1BP1L-202ENST00000356828 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC31.81■■■□□ 2.68
SHANK2Q9UPX8 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC31.81■■■□□ 2.68
SHANK2Q9UPX8 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC31.81■■■□□ 2.68
SHANK2Q9UPX8 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SHANK2Q9UPX8 PEX10-204ENST00000507596 1941 ntAPPRIS ALT1 TSL 5 BASIC31.81■■■□□ 2.68
SHANK2Q9UPX8 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC31.81■■■□□ 2.68
SHANK2Q9UPX8 RGS6-209ENST00000553525 2005 ntAPPRIS ALT1 TSL 2 BASIC31.81■■■□□ 2.68
SHANK2Q9UPX8 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 NOX4-209ENST00000527626 1774 ntTSL 2 BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC31.8■■■□□ 2.68
SHANK2Q9UPX8 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC31.79■■■□□ 2.68
SHANK2Q9UPX8 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SHANK2Q9UPX8 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC31.79■■■□□ 2.68
SHANK2Q9UPX8 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
SHANK2Q9UPX8 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
SHANK2Q9UPX8 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC31.79■■■□□ 2.68
SHANK2Q9UPX8 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC31.78■■■□□ 2.68
SHANK2Q9UPX8 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SHANK2Q9UPX8 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC31.77■■■□□ 2.68
SHANK2Q9UPX8 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC31.77■■■□□ 2.68
SHANK2Q9UPX8 RAX2-202ENST00000555978 2145 ntAPPRIS P1 TSL 1 (best) BASIC31.77■■■□□ 2.68
SHANK2Q9UPX8 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC31.77■■■□□ 2.68
SHANK2Q9UPX8 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC31.77■■■□□ 2.68
SHANK2Q9UPX8 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC31.77■■■□□ 2.68
SHANK2Q9UPX8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC31.77■■■□□ 2.68
SHANK2Q9UPX8 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC31.76■■■□□ 2.68
SHANK2Q9UPX8 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SHANK2Q9UPX8 ITM2C-210ENST00000620962 501 ntBASIC31.76■■■□□ 2.67
SHANK2Q9UPX8 TBCB-214ENST00000629269 413 ntTSL 5 BASIC31.76■■■□□ 2.67
SHANK2Q9UPX8 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC31.76■■■□□ 2.67
SHANK2Q9UPX8 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
SHANK2Q9UPX8 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 MFSD6L-201ENST00000329805 2188 ntAPPRIS P1 BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 PKM-204ENST00000449901 2526 ntTSL 2 BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 RARRES2P4-201ENST00000514074 484 ntBASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 ISCU-212ENST00000547005 795 ntTSL 3 BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC31.75■■■□□ 2.67
SHANK2Q9UPX8 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC31.75■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms