Protein–RNA interactions for Protein: Q9NY12

GAR1, H/ACA ribonucleoprotein complex subunit 1, humanhuman

Known RBP Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAR1Q9NY12 FXYD3-201ENST00000344013 1404 ntTSL 5 BASIC17.12■□□□□ 0.33
GAR1Q9NY12 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
GAR1Q9NY12 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.12■□□□□ 0.33
GAR1Q9NY12 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
GAR1Q9NY12 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAR1Q9NY12 UBA5-208ENST00000473651 1513 ntTSL 5 BASIC17.11■□□□□ 0.33
GAR1Q9NY12 NPNT-204ENST00000453617 2419 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
GAR1Q9NY12 GALNT10-201ENST00000297107 5961 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAR1Q9NY12 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC17.11■□□□□ 0.33
GAR1Q9NY12 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAR1Q9NY12 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAR1Q9NY12 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GAR1Q9NY12 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAR1Q9NY12 AC096631.2-201ENST00000436136 790 ntBASIC17.11■□□□□ 0.33
GAR1Q9NY12 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC17.11■□□□□ 0.33
GAR1Q9NY12 MEIS1-AS3-201ENST00000454167 707 ntTSL 4 BASIC17.11■□□□□ 0.33
GAR1Q9NY12 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
GAR1Q9NY12 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC17.11■□□□□ 0.33
GAR1Q9NY12 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GAR1Q9NY12 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC17.11■□□□□ 0.33
GAR1Q9NY12 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.1■□□□□ 0.33
GAR1Q9NY12 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAR1Q9NY12 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
GAR1Q9NY12 AL020996.1-203ENST00000536896 2307 ntBASIC17.1■□□□□ 0.33
GAR1Q9NY12 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
GAR1Q9NY12 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
GAR1Q9NY12 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
GAR1Q9NY12 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAR1Q9NY12 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAR1Q9NY12 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAR1Q9NY12 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GAR1Q9NY12 TMEM80-201ENST00000397510 1094 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
GAR1Q9NY12 SRD5A1P1-201ENST00000442297 786 ntBASIC17.1■□□□□ 0.33
GAR1Q9NY12 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC17.1■□□□□ 0.33
GAR1Q9NY12 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC17.1■□□□□ 0.33
GAR1Q9NY12 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GAR1Q9NY12 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 PYCARD-201ENST00000247470 990 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC17.09■□□□□ 0.33
GAR1Q9NY12 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC17.09■□□□□ 0.33
GAR1Q9NY12 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC17.09■□□□□ 0.33
GAR1Q9NY12 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC17.09■□□□□ 0.33
GAR1Q9NY12 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC17.09■□□□□ 0.33
GAR1Q9NY12 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.09■□□□□ 0.33
GAR1Q9NY12 CA9-204ENST00000617161 1374 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 GATM-206ENST00000558336 1522 ntTSL 2 BASIC17.09■□□□□ 0.33
GAR1Q9NY12 PPP1R12B-202ENST00000356764 1687 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 EPHX3-204ENST00000602233 1805 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GAR1Q9NY12 MAPT-210ENST00000535772 5718 ntTSL 5 BASIC17.09■□□□□ 0.33
GAR1Q9NY12 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 COMT-203ENST00000403184 2217 ntTSL 2 BASIC17.09■□□□□ 0.33
GAR1Q9NY12 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GAR1Q9NY12 NBPF9-209ENST00000621645 5632 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
GAR1Q9NY12 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAR1Q9NY12 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAR1Q9NY12 PTPA-223ENST00000452489 2526 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
GAR1Q9NY12 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.08■□□□□ 0.33
GAR1Q9NY12 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.08■□□□□ 0.33
GAR1Q9NY12 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
GAR1Q9NY12 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAR1Q9NY12 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.33
GAR1Q9NY12 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
GAR1Q9NY12 LINC01960-201ENST00000563759 1884 ntBASIC17.08■□□□□ 0.33
GAR1Q9NY12 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
GAR1Q9NY12 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC17.08■□□□□ 0.32
GAR1Q9NY12 THOC6-202ENST00000326266 1419 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAR1Q9NY12 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC17.08■□□□□ 0.32
GAR1Q9NY12 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GAR1Q9NY12 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GAR1Q9NY12 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC17.08■□□□□ 0.32
GAR1Q9NY12 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.08■□□□□ 0.32
GAR1Q9NY12 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
GAR1Q9NY12 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAR1Q9NY12 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAR1Q9NY12 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
GAR1Q9NY12 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAR1Q9NY12 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAR1Q9NY12 SLC35A2-210ENST00000616181 1614 ntTSL 2 BASIC17.07■□□□□ 0.32
GAR1Q9NY12 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
GAR1Q9NY12 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAR1Q9NY12 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GAR1Q9NY12 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAR1Q9NY12 DUX4L19-201ENST00000557448 1267 ntBASIC17.07■□□□□ 0.32
GAR1Q9NY12 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC17.07■□□□□ 0.32
GAR1Q9NY12 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GAR1Q9NY12 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.07■□□□□ 0.32
GAR1Q9NY12 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAR1Q9NY12 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAR1Q9NY12 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GAR1Q9NY12 AC004687.1-201ENST00000579003 1625 ntBASIC17.07■□□□□ 0.32
GAR1Q9NY12 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GAR1Q9NY12 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC17.06■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms