Protein–RNA interactions for Protein: Q9NUD5

ZCCHC3, Zinc finger CCHC domain-containing protein 3, humanhuman

Known RBP Predictions only

Length 404 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZCCHC3Q9NUD5 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 AL136967.2-201ENST00000623968 743 ntBASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
ZCCHC3Q9NUD5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 PXK-203ENST00000383715 1756 ntTSL 5 BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 SMURF1-202ENST00000361368 5581 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 SPOP-206ENST00000504102 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 AC005229.4-201ENST00000610085 2198 ntBASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
ZCCHC3Q9NUD5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
ZCCHC3Q9NUD5 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 MIR572-201ENST00000384983 95 ntBASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 AC009237.3-201ENST00000393279 1427 ntBASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
ZCCHC3Q9NUD5 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 SUDS3P1-201ENST00000505831 966 ntBASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 PALM-208ENST00000592155 2272 ntTSL 4 BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 FEM1AP4-201ENST00000443167 1987 ntBASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
ZCCHC3Q9NUD5 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 CCDC107-205ENST00000421582 1324 ntAPPRIS ALT2 TSL 2 BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 AF106564.1-201ENST00000607058 2553 ntBASIC19.87■□□□□ 0.77
ZCCHC3Q9NUD5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC3Q9NUD5 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC3Q9NUD5 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC3Q9NUD5 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.86■□□□□ 0.77
ZCCHC3Q9NUD5 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
ZCCHC3Q9NUD5 AC142381.2-201ENST00000566120 298 ntBASIC19.86■□□□□ 0.77
ZCCHC3Q9NUD5 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.86■□□□□ 0.77
ZCCHC3Q9NUD5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
ZCCHC3Q9NUD5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
ZCCHC3Q9NUD5 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.85■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms