Protein–RNA interactions for Protein: Q9NQS3

NECTIN3, Nectin-3, humanhuman

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3Q9NQS3 SLC16A10-202ENST00000368851 2508 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 HSPB2-201ENST00000304298 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
NECTIN3Q9NQS3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN3Q9NQS3 AC073130.3-201ENST00000624389 2278 ntBASIC20.25■□□□□ 0.83
NECTIN3Q9NQS3 LINC01123-202ENST00000419296 2436 ntTSL 2 BASIC20.25■□□□□ 0.83
NECTIN3Q9NQS3 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN3Q9NQS3 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN3Q9NQS3 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN3Q9NQS3 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN3Q9NQS3 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN3Q9NQS3 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN3Q9NQS3 COMT-202ENST00000361682 2437 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
NECTIN3Q9NQS3 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 AC123595.1-201ENST00000440769 1046 ntBASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 PLD4-205ENST00000553861 667 ntTSL 2 BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 RAB43-208ENST00000615093 783 ntTSL 5 BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 SOX18-201ENST00000340356 1864 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 AC074143.1-203ENST00000518227 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
NECTIN3Q9NQS3 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 YY1AP1-214ENST00000407221 2705 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 TPRG1LP1-201ENST00000598702 760 ntBASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.23■□□□□ 0.83
NECTIN3Q9NQS3 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 GAS2L1-206ENST00000610653 2238 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 AP004607.7-201ENST00000527152 1677 ntBASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NECTIN3Q9NQS3 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 TMEM61-201ENST00000371268 1097 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 AC092675.2-201ENST00000413274 541 ntTSL 4 BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 KCNMA1-209ENST00000372443 5059 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 LINC02228-203ENST00000641970 1355 ntBASIC20.21■□□□□ 0.83
NECTIN3Q9NQS3 DCAF4-202ENST00000358377 2024 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.83
NECTIN3Q9NQS3 DUSP9-202ENST00000370167 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 CCDC92B-201ENST00000575506 885 ntBASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 PXK-203ENST00000383715 1756 ntTSL 5 BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 DUSP5-201ENST00000369583 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 AC026310.3-201ENST00000625186 2373 ntBASIC20.2■□□□□ 0.82
NECTIN3Q9NQS3 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 RNF149-201ENST00000295317 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NECTIN3Q9NQS3 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 21.8 ms