Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC19.99■□□□□ 0.79
NEUROD4Q9HD90 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 AC099791.1-201ENST00000416440 715 ntBASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 LGR4-203ENST00000480977 492 ntTSL 2 BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 AC008764.7-201ENST00000593779 1081 ntBASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 USP48-205ENST00000421625 2818 ntTSL 2 BASIC19.98■□□□□ 0.79
NEUROD4Q9HD90 SLC35A3-210ENST00000638371 2298 ntTSL 5 BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 LHPP-203ENST00000392757 840 ntTSL 3 BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 AP001330.3-201ENST00000520123 633 ntBASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 FAM174B-207ENST00000555748 866 ntAPPRIS ALT2 TSL 3 BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 MCRIP1-205ENST00000572645 1038 ntTSL 1 (best) BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 GRAMD4P4-201ENST00000613563 1115 ntBASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
NEUROD4Q9HD90 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 DNM2-205ENST00000585892 2774 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 AC009237.3-201ENST00000393279 1427 ntBASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 AC005229.4-201ENST00000610085 2198 ntBASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 NDUFAF1-201ENST00000260361 1461 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
NEUROD4Q9HD90 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 SCLY-201ENST00000254663 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 AL355001.2-201ENST00000620617 1191 ntBASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 TSPY26P-201ENST00000476365 1326 ntBASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC19.95■□□□□ 0.78
NEUROD4Q9HD90 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 DIRAS1-202ENST00000585334 774 ntAPPRIS P1 BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.94■□□□□ 0.78
NEUROD4Q9HD90 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 AC026271.2-201ENST00000428091 497 ntBASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 AC091305.1-201ENST00000479476 895 ntBASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 AC105233.4-201ENST00000642045 216 ntBASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 RASA4CP-201ENST00000424092 1398 ntBASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
NEUROD4Q9HD90 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
NEUROD4Q9HD90 BSN-AS2-201ENST00000421598 2603 ntTSL 2 BASIC19.92■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms