Protein–RNA interactions for Protein: Q9HCP0

CSNK1G1, Casein kinase I isoform gamma-1, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1G1Q9HCP0 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G1Q9HCP0 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G1Q9HCP0 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G1Q9HCP0 C6orf136-201ENST00000293604 1978 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G1Q9HCP0 SPHK1-202ENST00000392496 1779 ntAPPRIS P3 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G1Q9HCP0 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G1Q9HCP0 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G1Q9HCP0 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G1Q9HCP0 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
CSNK1G1Q9HCP0 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G1Q9HCP0 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G1Q9HCP0 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.29■■□□□ 1.16
CSNK1G1Q9HCP0 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G1Q9HCP0 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
CSNK1G1Q9HCP0 GATA3-AS1-204ENST00000438755 675 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G1Q9HCP0 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC22.29■■□□□ 1.16
CSNK1G1Q9HCP0 SLC7A5P1-201ENST00000568957 537 ntBASIC22.29■■□□□ 1.16
CSNK1G1Q9HCP0 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.29■■□□□ 1.16
CSNK1G1Q9HCP0 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC22.29■■□□□ 1.16
CSNK1G1Q9HCP0 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 BID-214ENST00000617586 542 ntTSL 5 BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 RARRES2P11-201ENST00000635158 484 ntBASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 DNAJC25-201ENST00000313525 2268 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
CSNK1G1Q9HCP0 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 SLC12A5-AS1-202ENST00000535913 1957 ntTSL 2 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 PARP1-202ENST00000366792 553 ntTSL 3 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 POU5F1P4-201ENST00000413175 1085 ntBASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 AC080013.1-202ENST00000465477 674 ntTSL 5 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 MYCNOS-205ENST00000641950 531 ntBASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.27■■□□□ 1.16
CSNK1G1Q9HCP0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 ZBTB46-202ENST00000302995 2335 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 EP400NL-214ENST00000641289 2402 ntBASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 PLAC9-202ENST00000372267 472 ntAPPRIS ALT2 TSL 3 BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 VSX1-206ENST00000444511 1197 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 MFSD11-216ENST00000590393 1141 ntBASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 AC080038.1-201ENST00000611274 1154 ntBASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 AC008175.2-201ENST00000612840 297 ntBASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 AC011767.1-201ENST00000617410 1153 ntBASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 PUS1-203ENST00000443358 1664 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
CSNK1G1Q9HCP0 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 SLC7A5P2-201ENST00000553010 536 ntBASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 RAP2CP1-201ENST00000605103 478 ntBASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC22.25■■□□□ 1.15
CSNK1G1Q9HCP0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC22.24■■□□□ 1.15
CSNK1G1Q9HCP0 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC22.24■■□□□ 1.15
CSNK1G1Q9HCP0 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSNK1G1Q9HCP0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSNK1G1Q9HCP0 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC22.24■■□□□ 1.15
CSNK1G1Q9HCP0 CERKL-203ENST00000374969 1330 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CSNK1G1Q9HCP0 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
CSNK1G1Q9HCP0 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
CSNK1G1Q9HCP0 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms