Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
SNX25Q9H3E2 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 PTRH1-201ENST00000335223 759 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 STX7-201ENST00000367937 1090 ntTSL 5 BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 MELTF-AS1-202ENST00000415244 951 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 AC024267.6-201ENST00000580603 583 ntTSL 3 BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 AL137784.2-201ENST00000607332 1000 ntBASIC22.64■■□□□ 1.21
SNX25Q9H3E2 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
SNX25Q9H3E2 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 LAMP5-AS1-201ENST00000443469 1928 ntTSL 2 BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 AC010542.4-201ENST00000563151 1910 ntBASIC22.63■■□□□ 1.21
SNX25Q9H3E2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 CAMKMT-202ENST00000402247 665 ntTSL 2 BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 AC138907.5-202ENST00000569484 235 ntBASIC22.63■■□□□ 1.21
SNX25Q9H3E2 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.63■■□□□ 1.21
SNX25Q9H3E2 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 BCL2L12-201ENST00000246784 990 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 CBR1-201ENST00000290349 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 EFCAB6-202ENST00000356087 1129 ntTSL 5 BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 ZPBP-201ENST00000046087 1213 ntAPPRIS P3 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 CTU2-202ENST00000453996 1751 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
SNX25Q9H3E2 C11orf96-202ENST00000528572 1834 ntBASIC22.61■■□□□ 1.21
SNX25Q9H3E2 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC22.61■■□□□ 1.21
SNX25Q9H3E2 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.61■■□□□ 1.21
SNX25Q9H3E2 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.61■■□□□ 1.21
SNX25Q9H3E2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC22.61■■□□□ 1.21
SNX25Q9H3E2 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC22.61■■□□□ 1.21
SNX25Q9H3E2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNX25Q9H3E2 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNX25Q9H3E2 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
SNX25Q9H3E2 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
SNX25Q9H3E2 FAM43A-201ENST00000329759 2494 ntAPPRIS P1 BASIC22.6■■□□□ 1.21
SNX25Q9H3E2 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNX25Q9H3E2 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNX25Q9H3E2 ME3-201ENST00000323418 1068 ntTSL 5 BASIC22.6■■□□□ 1.21
SNX25Q9H3E2 AC010141.2-201ENST00000452426 721 ntBASIC22.6■■□□□ 1.21
SNX25Q9H3E2 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC22.6■■□□□ 1.21
SNX25Q9H3E2 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC22.6■■□□□ 1.21
SNX25Q9H3E2 AC092437.1-201ENST00000624794 1048 ntBASIC22.6■■□□□ 1.21
SNX25Q9H3E2 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNX25Q9H3E2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
SNX25Q9H3E2 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
SNX25Q9H3E2 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.6■■□□□ 1.21
SNX25Q9H3E2 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 HSCB-202ENST00000398941 955 ntTSL 2 BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC22.59■■□□□ 1.21
SNX25Q9H3E2 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNX25Q9H3E2 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC22.58■■□□□ 1.21
SNX25Q9H3E2 AC004911.1-201ENST00000416316 871 ntBASIC22.58■■□□□ 1.21
SNX25Q9H3E2 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC22.58■■□□□ 1.21
SNX25Q9H3E2 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC22.58■■□□□ 1.21
SNX25Q9H3E2 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.58■■□□□ 1.21
SNX25Q9H3E2 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC22.58■■□□□ 1.21
SNX25Q9H3E2 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC22.58■■□□□ 1.2
SNX25Q9H3E2 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC22.58■■□□□ 1.2
SNX25Q9H3E2 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC22.58■■□□□ 1.2
SNX25Q9H3E2 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC22.58■■□□□ 1.2
SNX25Q9H3E2 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC22.57■■□□□ 1.2
SNX25Q9H3E2 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC22.57■■□□□ 1.2
SNX25Q9H3E2 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC22.57■■□□□ 1.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms