Protein–RNA interactions for Protein: Q9H2H9

SLC38A1, Sodium-coupled neutral amino acid transporter 1, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1Q9H2H9 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC38A1Q9H2H9 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
SLC38A1Q9H2H9 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A1Q9H2H9 FGF8-204ENST00000347978 823 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A1Q9H2H9 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
SLC38A1Q9H2H9 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.64■□□□□ 0.73
SLC38A1Q9H2H9 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
SLC38A1Q9H2H9 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
SLC38A1Q9H2H9 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC19.64■□□□□ 0.73
SLC38A1Q9H2H9 NRXN2-205ENST00000409571 6381 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 IKBKG-206ENST00000594239 2299 ntAPPRIS P3 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 AC009237.3-201ENST00000393279 1427 ntBASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 AC091305.1-201ENST00000479476 895 ntBASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 AL136967.2-201ENST00000623968 743 ntBASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 AOC3-207ENST00000617500 2392 ntTSL 4 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 P2RX4-202ENST00000337233 2032 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 SLC13A3-204ENST00000413164 2008 ntTSL 2 BASIC19.63■□□□□ 0.73
SLC38A1Q9H2H9 ARSA-202ENST00000356098 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 SDSL-201ENST00000345635 1397 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 AC055733.4-201ENST00000638462 1354 ntBASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 LAMTOR1-201ENST00000278671 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 HES6-202ENST00000409002 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 DRD2-202ENST00000362072 2789 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
SLC38A1Q9H2H9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 NRXN2-203ENST00000377551 6373 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 MIR572-201ENST00000384983 95 ntBASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 C10orf55-202ENST00000412307 2360 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
SLC38A1Q9H2H9 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 NINJ1-201ENST00000375446 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 C11orf91-201ENST00000379011 811 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 SUDS3P1-201ENST00000505831 966 ntBASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 CALM1-203ENST00000544280 1064 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 PRR7-201ENST00000323249 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
SLC38A1Q9H2H9 YBX3-202ENST00000279550 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC38A1Q9H2H9 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC38A1Q9H2H9 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC38A1Q9H2H9 ZDHHC5-204ENST00000527985 2817 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC38A1Q9H2H9 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC38A1Q9H2H9 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC38A1Q9H2H9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
SLC38A1Q9H2H9 ALX3-201ENST00000369792 1859 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
SLC38A1Q9H2H9 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms