Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
CCSER1Q9C0I3 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC23.8■■□□□ 1.4
CCSER1Q9C0I3 BAALC-205ENST00000438105 2662 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
CCSER1Q9C0I3 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC23.8■■□□□ 1.4
CCSER1Q9C0I3 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC23.8■■□□□ 1.4
CCSER1Q9C0I3 ACHE-201ENST00000241069 2172 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCSER1Q9C0I3 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCSER1Q9C0I3 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC23.8■■□□□ 1.4
CCSER1Q9C0I3 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC23.8■■□□□ 1.4
CCSER1Q9C0I3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCSER1Q9C0I3 AL137060.1-201ENST00000618151 2648 ntBASIC23.8■■□□□ 1.4
CCSER1Q9C0I3 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 LTC4S-202ENST00000401985 486 ntTSL 3 BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 AL138963.3-201ENST00000610057 588 ntTSL 4 BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 AC135048.1-201ENST00000566056 1318 ntTSL 2 BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 DAPK3-202ENST00000545797 2257 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
CCSER1Q9C0I3 DYM-203ENST00000442713 2147 ntTSL 2 BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 NARF-205ENST00000412079 1760 ntTSL 5 BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 ZNRF2P3-201ENST00000424200 374 ntBASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 ILKAP-211ENST00000612675 1335 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCSER1Q9C0I3 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 JTB-203ENST00000368589 1216 ntTSL 2 BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 CCDC28B-201ENST00000373602 1089 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 CHTF8-210ENST00000523421 766 ntTSL 3 BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCSER1Q9C0I3 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 AC138649.1-201ENST00000619611 1449 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 AK1-201ENST00000223836 736 ntTSL 3 BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 NMRAL1-202ENST00000404295 1233 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 RNF114-202ENST00000622920 1284 ntTSL 5 BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 OTOP1-201ENST00000296358 1864 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 RASSF1-203ENST00000359365 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCSER1Q9C0I3 TRIM28-201ENST00000253024 2960 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCSER1Q9C0I3 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCSER1Q9C0I3 EEF1DP3-203ENST00000566025 782 ntBASIC23.75■■□□□ 1.39
CCSER1Q9C0I3 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCSER1Q9C0I3 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCSER1Q9C0I3 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC23.75■■□□□ 1.39
CCSER1Q9C0I3 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCSER1Q9C0I3 MFF-207ENST00000409565 1548 ntTSL 2 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 RNF146-206ENST00000480444 843 ntTSL 2 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 RASD1-202ENST00000579152 1404 ntTSL 2 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 AL024507.2-201ENST00000606070 2574 ntBASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 STX5-203ENST00000394690 1568 ntTSL 5 BASIC23.74■■□□□ 1.39
CCSER1Q9C0I3 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC23.73■■□□□ 1.39
CCSER1Q9C0I3 CHN1-203ENST00000409156 1761 ntTSL 2 BASIC23.73■■□□□ 1.39
CCSER1Q9C0I3 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC23.73■■□□□ 1.39
CCSER1Q9C0I3 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC23.73■■□□□ 1.39
CCSER1Q9C0I3 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC23.73■■□□□ 1.39
CCSER1Q9C0I3 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms