Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
RSPO3Q9BXY4 TMEM129-201ENST00000303277 2678 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
RSPO3Q9BXY4 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 AC135279.3-201ENST00000610945 1311 ntBASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 MGAT5B-207ENST00000565675 872 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 BAG1-212ENST00000641048 1038 ntAPPRIS P3 BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 AL049796.1-201ENST00000565336 1766 ntBASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.57■□□□□ 0.72
RSPO3Q9BXY4 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 UBA5-211ENST00000493720 2058 ntTSL 5 BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 SPRTN-201ENST00000008440 1667 ntTSL 2 BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 GNB2-209ENST00000436220 1479 ntTSL 5 BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 MBNL3-202ENST00000370844 1643 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 AL355987.3-201ENST00000456614 735 ntAPPRIS P1 TSL 4 BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 ITGA9-AS1-210ENST00000457661 738 ntTSL 4 BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 SCO2-204ENST00000543927 1051 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
RSPO3Q9BXY4 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 KLF14-201ENST00000583337 2827 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 YIF1B-202ENST00000337679 1257 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 IGHV3-19-201ENST00000521488 291 ntBASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 MAG-206ENST00000597035 542 ntTSL 4 BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 AC092902.2-206ENST00000625484 846 ntTSL 5 BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
RSPO3Q9BXY4 BASP1-201ENST00000322611 1878 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 SH3BP2-204ENST00000452765 2265 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 MTMR9LP-204ENST00000441044 2624 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 PEMT-206ENST00000435340 960 ntTSL 5 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 AC096631.2-201ENST00000436136 790 ntBASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 AL359317.1-201ENST00000556316 578 ntTSL 4 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 ZNF846-212ENST00000592859 1206 ntTSL 2 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 AC008764.7-201ENST00000593779 1081 ntBASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 AL031432.3-201ENST00000607698 485 ntBASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 NEDD4L-237ENST00000617539 728 ntTSL 2 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 PRSS22-201ENST00000161006 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 AC055733.4-201ENST00000638462 1354 ntBASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 PCED1A-202ENST00000360652 2016 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.54■□□□□ 0.72
RSPO3Q9BXY4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO3Q9BXY4 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO3Q9BXY4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
RSPO3Q9BXY4 MYL5-208ENST00000511290 781 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO3Q9BXY4 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO3Q9BXY4 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.53■□□□□ 0.72
RSPO3Q9BXY4 AC110285.6-201ENST00000617652 491 ntBASIC19.53■□□□□ 0.72
RSPO3Q9BXY4 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO3Q9BXY4 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC19.53■□□□□ 0.72
RSPO3Q9BXY4 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
RSPO3Q9BXY4 EIPR1-206ENST00000443925 1771 ntTSL 3 BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 LKAAEAR1-201ENST00000302096 761 ntAPPRIS ALT2 TSL 2 BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 LKAAEAR1-202ENST00000308906 868 ntAPPRIS P2 TSL 1 (best) BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 AC099791.1-201ENST00000416440 715 ntBASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 AC126544.1-201ENST00000580842 1059 ntBASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC19.52■□□□□ 0.72
RSPO3Q9BXY4 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC19.52■□□□□ 0.71
RSPO3Q9BXY4 ABLIM2-204ENST00000407564 2291 ntAPPRIS ALT2 TSL 1 (best) BASIC19.51■□□□□ 0.71
RSPO3Q9BXY4 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms