Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCM2Q9BSQ5 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 PPP3CC-202ENST00000289963 2135 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 COX20-201ENST00000366528 568 ntTSL 2 BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 AL162430.1-201ENST00000480705 870 ntBASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 NTF6G-201ENST00000591094 616 ntBASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.88■□□□□ 0.93
CCM2Q9BSQ5 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
CCM2Q9BSQ5 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCM2Q9BSQ5 ANKRD28-201ENST00000399451 6564 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 FBXW4P1-201ENST00000426721 2239 ntBASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 UBE2D3-201ENST00000321805 1087 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 KRT18P5-201ENST00000436075 1291 ntBASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 EEF1DP3-203ENST00000566025 782 ntBASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 AC053503.5-201ENST00000601508 636 ntBASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 SLC35A2-212ENST00000634665 486 ntTSL 4 BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 TMEM182-210ENST00000639249 1025 ntTSL 5 BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 GATA1-202ENST00000376670 1497 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 AP004607.4-201ENST00000530158 1459 ntBASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.85■□□□□ 0.93
CCM2Q9BSQ5 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 PARL-206ENST00000435888 1098 ntTSL 5 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 TESC-206ENST00000541210 936 ntTSL 3 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 AC012414.4-201ENST00000560839 1074 ntTSL 5 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 IGFALS-203ENST00000568221 730 ntTSL 4 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 AC060814.5-201ENST00000630916 1074 ntTSL 2 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 AC004854.2-201ENST00000608450 1441 ntBASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC20.84■□□□□ 0.93
CCM2Q9BSQ5 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
CCM2Q9BSQ5 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms