Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 TNFRSF25-201ENST00000348333 1119 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 TNFRSF25-202ENST00000351748 705 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 HOXA11-AS1_1.1-201ENST00000613939 98 ntBASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 SLC9A3R1-201ENST00000262613 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 CAMK2B-216ENST00000440254 2097 ntAPPRIS P4 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 AP004607.7-201ENST00000527152 1677 ntBASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC17.87■□□□□ 0.45
HDHD3Q9BSH5 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 E4F1-204ENST00000564139 2493 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 SERBP1P1-201ENST00000396021 1160 ntBASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 SNAI3-AS1-201ENST00000563261 998 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC17.86■□□□□ 0.45
HDHD3Q9BSH5 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 WTAP-201ENST00000337387 1622 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 TSKS-202ENST00000358830 1367 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 HES6-206ENST00000409574 738 ntTSL 2 BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 CDK18-203ENST00000429964 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 KANK3-203ENST00000593649 2672 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 AC092171.4-201ENST00000609130 632 ntBASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 SNCB-206ENST00000614675 1407 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.85■□□□□ 0.45
HDHD3Q9BSH5 KRT3-201ENST00000417996 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 NAE1-203ENST00000379463 1909 ntTSL 2 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 TMEM125-201ENST00000432792 1850 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 ZC3HAV1L-201ENST00000275766 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 PNMA2-204ENST00000522362 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 SRR-208ENST00000576848 588 ntTSL 4 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 FIP1L1-201ENST00000306932 1878 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 GPC1-202ENST00000420138 1835 ntTSL 5 BASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 AL049796.1-201ENST00000565336 1766 ntBASIC17.84■□□□□ 0.45
HDHD3Q9BSH5 CHRNB2-205ENST00000637900 2390 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.45
HDHD3Q9BSH5 LINC01006-201ENST00000333319 2292 ntBASIC17.83■□□□□ 0.45
HDHD3Q9BSH5 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC17.83■□□□□ 0.45
HDHD3Q9BSH5 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC17.83■□□□□ 0.45
HDHD3Q9BSH5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDHD3Q9BSH5 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC17.83■□□□□ 0.44
HDHD3Q9BSH5 KISS1-201ENST00000367194 709 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDHD3Q9BSH5 TRIR-205ENST00000592273 783 ntTSL 3 BASIC17.83■□□□□ 0.44
HDHD3Q9BSH5 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
HDHD3Q9BSH5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDHD3Q9BSH5 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDHD3Q9BSH5 GFI1-202ENST00000370332 2855 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
HDHD3Q9BSH5 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.44
HDHD3Q9BSH5 PALM-207ENST00000590161 2137 ntTSL 4 BASIC17.83■□□□□ 0.44
HDHD3Q9BSH5 FOXD4L3-201ENST00000342833 2039 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 USP39-203ENST00000409470 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 SLC47A1P1-202ENST00000449666 945 ntBASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 AC007009.1-201ENST00000458624 429 ntTSL 2 BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 SERGEF-219ENST00000532265 1124 ntTSL 2 BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 AL034346.1-201ENST00000568244 1277 ntBASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
HDHD3Q9BSH5 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms