Protein–RNA interactions for Protein: Q9BQW3

EBF4, Transcription factor COE4, humanhuman

Predictions only

Length 602 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EBF4Q9BQW3 GNA14-201ENST00000341700 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 TPI1-210ENST00000613953 1460 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 AC010997.5-201ENST00000609182 354 ntBASIC20.65■□□□□ 0.9
EBF4Q9BQW3 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
EBF4Q9BQW3 AC003102.1-202ENST00000563394 1796 ntBASIC20.64■□□□□ 0.9
EBF4Q9BQW3 SUSD1-203ENST00000374264 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
EBF4Q9BQW3 AC007952.6-201ENST00000573168 2673 ntBASIC20.64■□□□□ 0.9
EBF4Q9BQW3 AC003957.1-201ENST00000625108 2673 ntBASIC20.64■□□□□ 0.9
EBF4Q9BQW3 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
EBF4Q9BQW3 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 pRNA.6-201ENST00000610482 90 ntBASIC20.64■□□□□ 0.89
EBF4Q9BQW3 pRNA.5-201ENST00000612139 90 ntBASIC20.64■□□□□ 0.89
EBF4Q9BQW3 pRNA.11-201ENST00000618423 90 ntBASIC20.64■□□□□ 0.89
EBF4Q9BQW3 pRNA.13-201ENST00000619112 90 ntBASIC20.64■□□□□ 0.89
EBF4Q9BQW3 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 AP005212.1-201ENST00000581547 1997 ntBASIC20.64■□□□□ 0.89
EBF4Q9BQW3 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 TDRD10-202ENST00000368482 2331 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
EBF4Q9BQW3 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 POMGNT2-201ENST00000344697 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 TTYH1-202ENST00000376530 1885 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 GABARAPL3-202ENST00000624044 1851 ntBASIC20.63■□□□□ 0.89
EBF4Q9BQW3 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 DNAAF3-202ENST00000455045 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 KRT125P-201ENST00000546827 989 ntBASIC20.63■□□□□ 0.89
EBF4Q9BQW3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 MIR4787-201ENST00000607364 84 ntBASIC20.63■□□□□ 0.89
EBF4Q9BQW3 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 TPM1-204ENST00000334895 1637 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 FEZF1-203ENST00000442488 2099 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EBF4Q9BQW3 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC20.62■□□□□ 0.89
EBF4Q9BQW3 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 AL117332.1-201ENST00000622628 974 ntBASIC20.62■□□□□ 0.89
EBF4Q9BQW3 AC241377.3-202ENST00000626088 1088 ntBASIC20.62■□□□□ 0.89
EBF4Q9BQW3 AC241585.3-202ENST00000628937 1088 ntBASIC20.62■□□□□ 0.89
EBF4Q9BQW3 AC245100.8-202ENST00000629247 1058 ntBASIC20.62■□□□□ 0.89
EBF4Q9BQW3 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 BRD9-202ENST00000467963 2156 ntAPPRIS P1 TSL 2 BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
EBF4Q9BQW3 CAPG-201ENST00000263867 1442 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 FAM173A-207ENST00000569529 1052 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EBF4Q9BQW3 LEFTY1-201ENST00000272134 1626 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 EBF1-202ENST00000380654 2345 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EBF4Q9BQW3 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC20.6■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms