Protein–RNA interactions for Protein: Q99569

PKP4, Plakophilin-4, humanhuman

Predictions only

Length 1,192 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4Q99569 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP4Q99569 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PKP4Q99569 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PKP4Q99569 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.66■□□□□ 0.9
PKP4Q99569 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PKP4Q99569 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC20.66■□□□□ 0.9
PKP4Q99569 MPPED1-203ENST00000443721 2507 ntAPPRIS P1 TSL 2 BASIC20.66■□□□□ 0.9
PKP4Q99569 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.65■□□□□ 0.9
PKP4Q99569 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC20.65■□□□□ 0.9
PKP4Q99569 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC20.65■□□□□ 0.9
PKP4Q99569 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC20.65■□□□□ 0.9
PKP4Q99569 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PKP4Q99569 AP004608.1-201ENST00000531319 1402 ntTSL 2 BASIC20.65■□□□□ 0.9
PKP4Q99569 UCK2-201ENST00000367879 1375 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 RPS6-203ENST00000380384 1355 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PKP4Q99569 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC20.65■□□□□ 0.9
PKP4Q99569 PRMT1-221ENST00000610806 1192 ntTSL 3 BASIC20.65■□□□□ 0.9
PKP4Q99569 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 SYNGR2-201ENST00000225777 2325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PKP4Q99569 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC20.64■□□□□ 0.9
PKP4Q99569 TUB-203ENST00000534099 1759 ntTSL 2 BASIC20.64■□□□□ 0.9
PKP4Q99569 PEX11G-203ENST00000593942 1345 ntTSL 5 BASIC20.64■□□□□ 0.89
PKP4Q99569 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.64■□□□□ 0.89
PKP4Q99569 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC20.64■□□□□ 0.89
PKP4Q99569 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
PKP4Q99569 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PKP4Q99569 CCDC92B-201ENST00000575506 885 ntBASIC20.64■□□□□ 0.89
PKP4Q99569 TERF1P2-201ENST00000583350 1212 ntBASIC20.64■□□□□ 0.89
PKP4Q99569 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
PKP4Q99569 LGR4-201ENST00000379214 5206 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PKP4Q99569 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PKP4Q99569 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PKP4Q99569 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
PKP4Q99569 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
PKP4Q99569 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PKP4Q99569 CDCP1-202ENST00000425231 1416 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
PKP4Q99569 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PKP4Q99569 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PKP4Q99569 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PKP4Q99569 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
PKP4Q99569 TPT1-AS1-211ENST00000520622 604 ntTSL 4 BASIC20.63■□□□□ 0.89
PKP4Q99569 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC20.63■□□□□ 0.89
PKP4Q99569 PRSS33-202ENST00000570702 1676 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
PKP4Q99569 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC20.63■□□□□ 0.89
PKP4Q99569 JUNB-201ENST00000302754 1820 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
PKP4Q99569 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PKP4Q99569 MFF-203ENST00000349901 1716 ntTSL 2 BASIC20.62■□□□□ 0.89
PKP4Q99569 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PKP4Q99569 EIF6-201ENST00000374436 1252 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
PKP4Q99569 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PKP4Q99569 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PKP4Q99569 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
PKP4Q99569 AC079140.4-201ENST00000507448 529 ntBASIC20.62■□□□□ 0.89
PKP4Q99569 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
PKP4Q99569 MDFI-203ENST00000373051 1622 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
PKP4Q99569 MFF-207ENST00000409565 1548 ntTSL 2 BASIC20.62■□□□□ 0.89
PKP4Q99569 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC20.62■□□□□ 0.89
PKP4Q99569 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
PKP4Q99569 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
PKP4Q99569 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PKP4Q99569 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
PKP4Q99569 FRMD3-204ENST00000376438 2198 ntTSL 2 BASIC20.61■□□□□ 0.89
PKP4Q99569 KRT18P14-201ENST00000534205 1250 ntBASIC20.61■□□□□ 0.89
PKP4Q99569 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC20.61■□□□□ 0.89
PKP4Q99569 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.61■□□□□ 0.89
PKP4Q99569 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PKP4Q99569 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PKP4Q99569 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
PKP4Q99569 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 GLI4-201ENST00000340042 1341 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 FADS6-204ENST00000614223 2044 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
PKP4Q99569 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC20.6■□□□□ 0.89
PKP4Q99569 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
PKP4Q99569 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
PKP4Q99569 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC20.59■□□□□ 0.89
PKP4Q99569 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
PKP4Q99569 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PKP4Q99569 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
PKP4Q99569 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
PKP4Q99569 MIR31HG-201ENST00000304425 745 ntTSL 2 BASIC20.59■□□□□ 0.89
PKP4Q99569 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms