Protein–RNA interactions for Protein: Q96JI7

SPG11, Spatacsin, humanhuman

Predictions only

Length 2,443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11Q96JI7 AC010980.2-201ENST00000587099 1412 ntBASIC18.1■□□□□ 0.49
SPG11Q96JI7 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SPG11Q96JI7 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC18.1■□□□□ 0.49
SPG11Q96JI7 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
SPG11Q96JI7 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC18.1■□□□□ 0.49
SPG11Q96JI7 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 PTGIR-205ENST00000597185 775 ntTSL 3 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 KRT16P2-201ENST00000414673 1423 ntBASIC18.09■□□□□ 0.49
SPG11Q96JI7 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 AKR7A2-201ENST00000235835 1362 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC18.09■□□□□ 0.49
SPG11Q96JI7 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SPG11Q96JI7 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPG11Q96JI7 PON2-217ENST00000633192 1876 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SPG11Q96JI7 RBM17P2-201ENST00000616397 1405 ntBASIC18.08■□□□□ 0.49
SPG11Q96JI7 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPG11Q96JI7 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SPG11Q96JI7 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SPG11Q96JI7 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC18.08■□□□□ 0.49
SPG11Q96JI7 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SPG11Q96JI7 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
SPG11Q96JI7 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC18.08■□□□□ 0.48
SPG11Q96JI7 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC18.08■□□□□ 0.48
SPG11Q96JI7 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
SPG11Q96JI7 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
SPG11Q96JI7 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC18.08■□□□□ 0.48
SPG11Q96JI7 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPG11Q96JI7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPG11Q96JI7 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPG11Q96JI7 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
SPG11Q96JI7 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 AC012618.2-201ENST00000428058 849 ntBASIC18.07■□□□□ 0.48
SPG11Q96JI7 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 Z99916.2-201ENST00000604037 246 ntBASIC18.07■□□□□ 0.48
SPG11Q96JI7 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 OR7E47P-201ENST00000546390 1422 ntBASIC18.07■□□□□ 0.48
SPG11Q96JI7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.07■□□□□ 0.48
SPG11Q96JI7 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPG11Q96JI7 ADRM1-204ENST00000491935 1530 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
SPG11Q96JI7 PRMT5-213ENST00000553897 1857 ntTSL 2 BASIC18.06■□□□□ 0.48
SPG11Q96JI7 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPG11Q96JI7 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPG11Q96JI7 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC18.06■□□□□ 0.48
SPG11Q96JI7 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC18.06■□□□□ 0.48
SPG11Q96JI7 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.06■□□□□ 0.48
SPG11Q96JI7 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC18.06■□□□□ 0.48
SPG11Q96JI7 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPG11Q96JI7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPG11Q96JI7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPG11Q96JI7 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC18.06■□□□□ 0.48
SPG11Q96JI7 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPG11Q96JI7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
SPG11Q96JI7 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPG11Q96JI7 DUSP28-201ENST00000343217 1555 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
SPG11Q96JI7 POU5F1P4-201ENST00000413175 1085 ntBASIC18.06■□□□□ 0.48
SPG11Q96JI7 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
SPG11Q96JI7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.06■□□□□ 0.48
SPG11Q96JI7 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC18.06■□□□□ 0.48
SPG11Q96JI7 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
SPG11Q96JI7 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPG11Q96JI7 DYRK2-202ENST00000344096 8912 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPG11Q96JI7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
SPG11Q96JI7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPG11Q96JI7 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
SPG11Q96JI7 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC18.05■□□□□ 0.48
SPG11Q96JI7 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC18.05■□□□□ 0.48
SPG11Q96JI7 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms