Protein–RNA interactions for Protein: Q96H15

TIMD4, T-cell immunoglobulin and mucin domain-containing protein 4, humanhuman

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMD4Q96H15 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
TIMD4Q96H15 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
TIMD4Q96H15 AC026185.1-201ENST00000445748 174 ntBASIC17.8■□□□□ 0.44
TIMD4Q96H15 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC17.8■□□□□ 0.44
TIMD4Q96H15 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC17.8■□□□□ 0.44
TIMD4Q96H15 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC17.8■□□□□ 0.44
TIMD4Q96H15 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC17.8■□□□□ 0.44
TIMD4Q96H15 AC073111.5-205ENST00000641717 521 ntBASIC17.8■□□□□ 0.44
TIMD4Q96H15 NABP2-203ENST00000380198 1775 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMD4Q96H15 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC17.8■□□□□ 0.44
TIMD4Q96H15 ZNF668-205ENST00000426488 2282 ntTSL 5 BASIC17.8■□□□□ 0.44
TIMD4Q96H15 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMD4Q96H15 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
TIMD4Q96H15 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMD4Q96H15 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC17.79■□□□□ 0.44
TIMD4Q96H15 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 PRKAA1-202ENST00000354209 1918 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC17.79■□□□□ 0.44
TIMD4Q96H15 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
TIMD4Q96H15 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
TIMD4Q96H15 UBE2DNL-204ENST00000602536 740 ntBASIC17.79■□□□□ 0.44
TIMD4Q96H15 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 MYCNOS-205ENST00000641950 531 ntBASIC17.79■□□□□ 0.44
TIMD4Q96H15 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.79■□□□□ 0.44
TIMD4Q96H15 MSRB1-201ENST00000361871 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 LINC01184-201ENST00000499346 1380 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
TIMD4Q96H15 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 DUX4-203ENST00000565211 1710 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 ANXA8-204ENST00000583911 1874 ntTSL 2 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 IRF2BP1-201ENST00000302165 2564 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 C9orf163-202ENST00000624034 2573 ntBASIC17.78■□□□□ 0.44
TIMD4Q96H15 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TIMD4Q96H15 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TIMD4Q96H15 KCNQ5-201ENST00000342056 6688 ntAPPRIS ALT1 TSL 5 BASIC17.77■□□□□ 0.44
TIMD4Q96H15 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMD4Q96H15 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMD4Q96H15 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC17.77■□□□□ 0.44
TIMD4Q96H15 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC17.77■□□□□ 0.44
TIMD4Q96H15 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMD4Q96H15 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC17.77■□□□□ 0.44
TIMD4Q96H15 POU5F1P4-201ENST00000413175 1085 ntBASIC17.77■□□□□ 0.44
TIMD4Q96H15 AC009086.2-201ENST00000449759 610 ntAPPRIS P1 TSL 3 BASIC17.77■□□□□ 0.44
TIMD4Q96H15 AC006970.2-201ENST00000450065 779 ntBASIC17.77■□□□□ 0.44
TIMD4Q96H15 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMD4Q96H15 HMX1-202ENST00000506970 651 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TIMD4Q96H15 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC17.77■□□□□ 0.44
TIMD4Q96H15 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC17.77■□□□□ 0.44
TIMD4Q96H15 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMD4Q96H15 SERTAD3-201ENST00000322354 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TIMD4Q96H15 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC17.77■□□□□ 0.44
TIMD4Q96H15 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC17.77■□□□□ 0.43
TIMD4Q96H15 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TIMD4Q96H15 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 SLC41A3-201ENST00000315891 1797 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 MEIS3-202ENST00000441740 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
TIMD4Q96H15 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC17.76■□□□□ 0.43
TIMD4Q96H15 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC17.76■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms