Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 ZNF800-208ENST00000619291 2099 ntTSL 5 BASIC21.3■■□□□ 1
CHMP6Q96FZ7 C17orf82-201ENST00000623772 1530 ntBASIC21.3■■□□□ 1
CHMP6Q96FZ7 BRI3-201ENST00000297290 780 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP6Q96FZ7 GBX1-201ENST00000297537 1092 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP6Q96FZ7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP6Q96FZ7 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC21.3■■□□□ 1
CHMP6Q96FZ7 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP6Q96FZ7 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP6Q96FZ7 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP6Q96FZ7 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP6Q96FZ7 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CHMP6Q96FZ7 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP6Q96FZ7 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHMP6Q96FZ7 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC21.29■■□□□ 1
CHMP6Q96FZ7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC21.29■■□□□ 1
CHMP6Q96FZ7 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP6Q96FZ7 PKIB-204ENST00000368448 1561 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
CHMP6Q96FZ7 HTRA2-202ENST00000352222 1450 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHMP6Q96FZ7 ASB1-202ENST00000409297 878 ntTSL 5 BASIC21.29■■□□□ 1
CHMP6Q96FZ7 AL590094.1-201ENST00000635581 706 ntTSL 2 BASIC21.29■■□□□ 1
CHMP6Q96FZ7 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CHMP6Q96FZ7 ME2-216ENST00000639850 2331 ntTSL 5 BASIC21.29■■□□□ 1
CHMP6Q96FZ7 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP6Q96FZ7 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CHMP6Q96FZ7 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.29■■□□□ 1
CHMP6Q96FZ7 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP6Q96FZ7 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP6Q96FZ7 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP6Q96FZ7 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP6Q96FZ7 PLCD1-201ENST00000334661 2769 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP6Q96FZ7 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC21.28■■□□□ 1
CHMP6Q96FZ7 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 AL355490.1-201ENST00000445808 805 ntTSL 3 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 ST3GAL6-AS1-203ENST00000488132 769 ntTSL 3 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 AC053527.1-201ENST00000502790 685 ntTSL 3 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CHMP6Q96FZ7 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC21.28■■□□□ 1
CHMP6Q96FZ7 C7orf49-203ENST00000430372 1579 ntTSL 5 BASIC21.27■■□□□ 1
CHMP6Q96FZ7 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC21.27■■□□□ 1
CHMP6Q96FZ7 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC21.27■■□□□ 1
CHMP6Q96FZ7 PTRH1-208ENST00000543175 814 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP6Q96FZ7 TK2-216ENST00000564917 1156 ntTSL 3 BASIC21.27■■□□□ 1
CHMP6Q96FZ7 MYL12B-203ENST00000581193 1249 ntAPPRIS P1 TSL 3 BASIC21.27■■□□□ 1
CHMP6Q96FZ7 CRLF1-201ENST00000392386 1792 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
CHMP6Q96FZ7 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHMP6Q96FZ7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC21.27■■□□□ 1
CHMP6Q96FZ7 WDR86-203ENST00000469830 1691 ntTSL 2 BASIC21.27■■□□□ 1
CHMP6Q96FZ7 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC21.27■■□□□ 1
CHMP6Q96FZ7 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
CHMP6Q96FZ7 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC21.27■□□□□ 0.99
CHMP6Q96FZ7 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC21.27■□□□□ 0.99
CHMP6Q96FZ7 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC21.27■□□□□ 0.99
CHMP6Q96FZ7 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 GPSM1-201ENST00000291775 2114 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 ME2-218ENST00000640965 2476 ntTSL 5 BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 SIGMAR1-201ENST00000277010 1656 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 EPM2A-202ENST00000435470 1278 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 GJC2-201ENST00000366714 2243 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 AC073314.1-201ENST00000568729 2216 ntBASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 PCDHAC2-203ENST00000615316 3011 ntBASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 PYCR3-207ENST00000495276 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC21.26■□□□□ 0.99
CHMP6Q96FZ7 IKBKG-212ENST00000617207 1949 ntAPPRIS ALT1 TSL 3 BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 LYN-202ENST00000519728 2297 ntAPPRIS P3 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 TTBK1-202ENST00000304139 2449 ntTSL 5 BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 OSCAR-206ENST00000391760 629 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 SCUBE1-201ENST00000290460 2258 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
CHMP6Q96FZ7 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 NUDT16L1-202ENST00000405142 2040 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 MTNR1B-201ENST00000257068 1565 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC21.24■□□□□ 0.99
CHMP6Q96FZ7 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms