Protein–RNA interactions for Protein: Q96FS4

SIPA1, Signal-induced proliferation-associated protein 1, humanhuman

Predictions only

Length 1,042 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1Q96FS4 TMEM191A-211ENST00000637163 1067 ntBASIC21.3■■□□□ 1
SIPA1Q96FS4 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
SIPA1Q96FS4 WDR86-207ENST00000621812 1542 ntTSL 5 BASIC21.29■■□□□ 1
SIPA1Q96FS4 CRTAC1-202ENST00000370591 2348 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
SIPA1Q96FS4 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SIPA1Q96FS4 TANGO2-201ENST00000327374 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIPA1Q96FS4 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIPA1Q96FS4 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIPA1Q96FS4 GRTP1-203ENST00000375431 1384 ntAPPRIS P3 TSL 1 (best) BASIC21.29■■□□□ 1
SIPA1Q96FS4 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SIPA1Q96FS4 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
SIPA1Q96FS4 AC073210.2-201ENST00000430369 194 ntBASIC21.29■■□□□ 1
SIPA1Q96FS4 TSPY20P-201ENST00000450910 630 ntBASIC21.29■■□□□ 1
SIPA1Q96FS4 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.29■■□□□ 1
SIPA1Q96FS4 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC21.29■■□□□ 1
SIPA1Q96FS4 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC21.29■■□□□ 1
SIPA1Q96FS4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC21.29■■□□□ 1
SIPA1Q96FS4 AC008694.1-202ENST00000636953 945 ntBASIC21.29■■□□□ 1
SIPA1Q96FS4 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
SIPA1Q96FS4 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.29■■□□□ 1
SIPA1Q96FS4 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
SIPA1Q96FS4 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
SIPA1Q96FS4 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC21.28■■□□□ 1
SIPA1Q96FS4 MMD-201ENST00000262065 2735 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIPA1Q96FS4 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
SIPA1Q96FS4 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
SIPA1Q96FS4 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIPA1Q96FS4 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIPA1Q96FS4 ZNF148-203ENST00000468369 1025 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIPA1Q96FS4 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC21.28■■□□□ 1
SIPA1Q96FS4 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC21.28■■□□□ 1
SIPA1Q96FS4 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC21.28■■□□□ 1
SIPA1Q96FS4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC21.28■■□□□ 1
SIPA1Q96FS4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC21.28■■□□□ 1
SIPA1Q96FS4 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC21.28■■□□□ 1
SIPA1Q96FS4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
SIPA1Q96FS4 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC21.27■■□□□ 1
SIPA1Q96FS4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC21.27■■□□□ 1
SIPA1Q96FS4 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIPA1Q96FS4 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
SIPA1Q96FS4 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIPA1Q96FS4 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC21.27■■□□□ 1
SIPA1Q96FS4 C4orf48-201ENST00000409248 433 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■■□□□ 1
SIPA1Q96FS4 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC21.27■■□□□ 1
SIPA1Q96FS4 MIR4758-201ENST00000577688 71 ntBASIC21.27■■□□□ 1
SIPA1Q96FS4 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC21.27■■□□□ 1
SIPA1Q96FS4 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC21.27■■□□□ 1
SIPA1Q96FS4 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.27■■□□□ 1
SIPA1Q96FS4 OR10C1-204ENST00000622521 1039 ntBASIC21.27■■□□□ 1
SIPA1Q96FS4 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC21.27■■□□□ 1
SIPA1Q96FS4 MKRN4P-201ENST00000444706 1521 ntBASIC21.27■■□□□ 1
SIPA1Q96FS4 ALDH5A1-204ENST00000491546 1699 ntTSL 5 BASIC21.27■■□□□ 1
SIPA1Q96FS4 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC21.27■■□□□ 1
SIPA1Q96FS4 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
SIPA1Q96FS4 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC21.27■□□□□ 0.99
SIPA1Q96FS4 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC21.27■□□□□ 0.99
SIPA1Q96FS4 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC21.27■□□□□ 0.99
SIPA1Q96FS4 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 AC069236.1-201ENST00000604339 616 ntBASIC21.26■□□□□ 0.99
SIPA1Q96FS4 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 UCHL5-205ENST00000367454 1815 ntAPPRIS ALT1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
SIPA1Q96FS4 CFAP99-206ENST00000616117 1941 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 KRT16P2-201ENST00000414673 1423 ntBASIC21.25■□□□□ 0.99
SIPA1Q96FS4 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 AC098934.4-201ENST00000564127 592 ntBASIC21.25■□□□□ 0.99
SIPA1Q96FS4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
SIPA1Q96FS4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC21.24■□□□□ 0.99
SIPA1Q96FS4 MIPEPP3-201ENST00000412105 444 ntBASIC21.24■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms