Protein–RNA interactions for Protein: Q96CC6

RHBDF1, Inactive rhomboid protein 1, humanhuman

Predictions only

Length 855 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1Q96CC6 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDF1Q96CC6 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC20.67■□□□□ 0.9
RHBDF1Q96CC6 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC20.67■□□□□ 0.9
RHBDF1Q96CC6 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDF1Q96CC6 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RHBDF1Q96CC6 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 AC005229.4-201ENST00000610085 2198 ntBASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 STOML2-201ENST00000356493 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 TRAF4-217ENST00000618771 543 ntTSL 5 BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC20.66■□□□□ 0.9
RHBDF1Q96CC6 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 ZDHHC7-203ENST00000564466 1488 ntTSL 5 BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 CDKN2D-201ENST00000335766 1086 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 STOML2-202ENST00000452248 1296 ntTSL 2 BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 STOML2-205ENST00000619795 1293 ntTSL 3 BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RHBDF1Q96CC6 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC20.64■□□□□ 0.9
RHBDF1Q96CC6 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
RHBDF1Q96CC6 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC20.64■□□□□ 0.9
RHBDF1Q96CC6 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
RHBDF1Q96CC6 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RHBDF1Q96CC6 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
RHBDF1Q96CC6 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 MPST-204ENST00000404393 1329 ntTSL 5 BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 HYI-206ENST00000372434 1025 ntTSL 5 BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 MIR638-201ENST00000385237 100 ntBASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 CTCF-202ENST00000401394 2978 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 DYM-203ENST00000442713 2147 ntTSL 2 BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 PAFAH1B2-205ENST00000529887 1056 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 ANKRD53-204ENST00000457410 1671 ntTSL 5 BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 PALM-208ENST00000592155 2272 ntTSL 4 BASIC20.64■□□□□ 0.89
RHBDF1Q96CC6 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 MRPL46-201ENST00000312475 1019 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 STOX2-205ENST00000513034 807 ntTSL 3 BASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 AL354811.1-201ENST00000610286 706 ntBASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 AF106564.1-201ENST00000607058 2553 ntBASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RHBDF1Q96CC6 OAF-201ENST00000328965 2525 ntAPPRIS P2 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 FAIM-203ENST00000393034 927 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 MED14OS-201ENST00000456333 900 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RHBDF1Q96CC6 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 EML2-201ENST00000245925 2264 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC20.61■□□□□ 0.89
RHBDF1Q96CC6 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms