Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEM54Q969K7 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC18.73■□□□□ 0.59
TMEM54Q969K7 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC18.73■□□□□ 0.59
TMEM54Q969K7 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
TMEM54Q969K7 HPCAL1-201ENST00000307845 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 FBXO27-202ENST00000509137 2130 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
TMEM54Q969K7 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.73■□□□□ 0.59
TMEM54Q969K7 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
TMEM54Q969K7 SH3GLB2-203ENST00000372564 2982 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM54Q969K7 EIF3J-202ENST00000424492 1550 ntTSL 4 BASIC18.72■□□□□ 0.59
TMEM54Q969K7 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
TMEM54Q969K7 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC18.72■□□□□ 0.59
TMEM54Q969K7 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM54Q969K7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM54Q969K7 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM54Q969K7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM54Q969K7 MRPL14-201ENST00000372014 959 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM54Q969K7 BCAP29-209ENST00000465919 942 ntTSL 2 BASIC18.72■□□□□ 0.59
TMEM54Q969K7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM54Q969K7 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
TMEM54Q969K7 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.72■□□□□ 0.59
TMEM54Q969K7 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM54Q969K7 GRK4-201ENST00000345167 2013 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM54Q969K7 GSG1L-202ENST00000395724 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM54Q969K7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM54Q969K7 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM54Q969K7 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
TMEM54Q969K7 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM54Q969K7 ASPDH-202ENST00000389208 1040 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
TMEM54Q969K7 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM54Q969K7 AC079140.4-201ENST00000507448 529 ntBASIC18.71■□□□□ 0.59
TMEM54Q969K7 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM54Q969K7 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC18.71■□□□□ 0.59
TMEM54Q969K7 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM54Q969K7 EEF1DP3-203ENST00000566025 782 ntBASIC18.71■□□□□ 0.59
TMEM54Q969K7 AC011511.3-201ENST00000587088 355 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM54Q969K7 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM54Q969K7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM54Q969K7 CLDN5-201ENST00000403084 2357 ntBASIC18.71■□□□□ 0.59
TMEM54Q969K7 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM54Q969K7 AC026310.3-201ENST00000625186 2373 ntBASIC18.71■□□□□ 0.59
TMEM54Q969K7 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM54Q969K7 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TMEM54Q969K7 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC18.71■□□□□ 0.59
TMEM54Q969K7 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
TMEM54Q969K7 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.58
TMEM54Q969K7 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 C12orf76-203ENST00000546651 1755 ntTSL 2 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 ZNF467-201ENST00000302017 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 ASMT-202ENST00000381233 989 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 AC093817.1-201ENST00000507296 812 ntTSL 3 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 LRRC37A17P-202ENST00000570478 572 ntTSL 4 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 TERF1P2-201ENST00000583350 1212 ntBASIC18.7■□□□□ 0.58
TMEM54Q969K7 AC053503.5-201ENST00000601508 636 ntBASIC18.7■□□□□ 0.58
TMEM54Q969K7 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.7■□□□□ 0.58
TMEM54Q969K7 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TMEM54Q969K7 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM54Q969K7 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM54Q969K7 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM54Q969K7 ELOA-201ENST00000418390 5154 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM54Q969K7 CELF2-213ENST00000633077 1733 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM54Q969K7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM54Q969K7 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC18.69■□□□□ 0.58
TMEM54Q969K7 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM54Q969K7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM54Q969K7 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM54Q969K7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC18.69■□□□□ 0.58
TMEM54Q969K7 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC18.69■□□□□ 0.58
TMEM54Q969K7 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
TMEM54Q969K7 AC007375.3-201ENST00000600936 2314 ntBASIC18.69■□□□□ 0.58
TMEM54Q969K7 EPHA8-202ENST00000374644 1802 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM54Q969K7 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TMEM54Q969K7 CLN8-213ENST00000637156 1897 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 58.8 ms