Protein–RNA interactions for Protein: Q8WVI0

SMIM4, Small integral membrane protein 4, humanhuman

Predictions only

Length 70 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4Q8WVI0 OSCAR-204ENST00000358375 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 OSCAR-210ENST00000616447 1358 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 MAF1-205ENST00000534585 1754 ntTSL 5 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC18.14■□□□□ 0.49
SMIM4Q8WVI0 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 FGF14-IT1-202ENST00000607251 2123 ntTSL 2 BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 FNDC4-201ENST00000264703 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 FSTL3-201ENST00000166139 2542 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 OR7E47P-201ENST00000546390 1422 ntBASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 EI24-211ENST00000534546 1544 ntTSL 2 BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 IL17RE-206ENST00000454190 2757 ntTSL 2 BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SMIM4Q8WVI0 TRPV6-209ENST00000638686 2298 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 RAB5A-201ENST00000273047 2536 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 DTX2-212ENST00000446820 1770 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 PCDHAC2-203ENST00000615316 3011 ntBASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
SMIM4Q8WVI0 MRFAP1-201ENST00000320912 2049 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 PEX5-204ENST00000412720 2105 ntTSL 2 BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 TNFSF11-203ENST00000398795 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 LY6H-201ENST00000342752 951 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 LY6H-202ENST00000414417 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 LY6H-203ENST00000430474 925 ntAPPRIS P3 TSL 3 BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 PLA2G10-201ENST00000438167 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 NKILA-201ENST00000613231 537 ntTSL 4 BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 U85056.1-201ENST00000616429 682 ntBASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 TMEM240-203ENST00000624426 796 ntTSL 3 BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 RBM45-207ENST00000616198 1788 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
SMIM4Q8WVI0 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 NAGK-229ENST00000613852 1801 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 DECR2-201ENST00000219481 1615 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 MIR6722-201ENST00000617286 78 ntBASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
SMIM4Q8WVI0 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 LAYN-204ENST00000525126 1763 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 C16orf59-201ENST00000361837 1662 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 KRT18P60-201ENST00000312876 1297 ntBASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 AL121899.1-202ENST00000411839 536 ntTSL 5 BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 AL031602.1-201ENST00000633169 911 ntBASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 RNF38-205ENST00000377877 1974 ntTSL 2 BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
SMIM4Q8WVI0 SDC3-202ENST00000339394 1580 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM4Q8WVI0 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM4Q8WVI0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
SMIM4Q8WVI0 NUDT18-201ENST00000611621 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms