Protein–RNA interactions for Protein: Q8TER0

SNED1, Sushi, nidogen and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 1,413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1Q8TER0 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
SNED1Q8TER0 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC26.07■■□□□ 1.76
SNED1Q8TER0 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC26.07■■□□□ 1.76
SNED1Q8TER0 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC26.06■■□□□ 1.76
SNED1Q8TER0 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC26.06■■□□□ 1.76
SNED1Q8TER0 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC26.06■■□□□ 1.76
SNED1Q8TER0 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC26.06■■□□□ 1.76
SNED1Q8TER0 KLF1-201ENST00000264834 1592 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNED1Q8TER0 SOCS7-202ENST00000613678 1827 ntTSL 5 BASIC26.06■■□□□ 1.76
SNED1Q8TER0 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNED1Q8TER0 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNED1Q8TER0 PTP4A3-203ENST00000520105 1866 ntTSL 5 BASIC26.06■■□□□ 1.76
SNED1Q8TER0 KRT16P2-201ENST00000414673 1423 ntBASIC26.06■■□□□ 1.76
SNED1Q8TER0 TNIP2-203ENST00000503235 1653 ntTSL 3 BASIC26.06■■□□□ 1.76
SNED1Q8TER0 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNED1Q8TER0 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
SNED1Q8TER0 RAD21L1-202ENST00000402452 1707 ntTSL 5 BASIC26.06■■□□□ 1.76
SNED1Q8TER0 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SNED1Q8TER0 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC26.05■■□□□ 1.76
SNED1Q8TER0 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNED1Q8TER0 AC026366.1-201ENST00000488803 879 ntBASIC26.05■■□□□ 1.76
SNED1Q8TER0 MIF4GD-202ENST00000325102 1306 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
SNED1Q8TER0 DYRK1B-201ENST00000323039 2535 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNED1Q8TER0 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNED1Q8TER0 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNED1Q8TER0 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
SNED1Q8TER0 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC26.05■■□□□ 1.76
SNED1Q8TER0 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
SNED1Q8TER0 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC26.05■■□□□ 1.76
SNED1Q8TER0 AP006294.2-201ENST00000641667 209 ntBASIC26.05■■□□□ 1.76
SNED1Q8TER0 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNED1Q8TER0 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNED1Q8TER0 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNED1Q8TER0 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC26.04■■□□□ 1.76
SNED1Q8TER0 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNED1Q8TER0 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
SNED1Q8TER0 AL158047.1-201ENST00000445918 881 ntBASIC26.04■■□□□ 1.76
SNED1Q8TER0 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC26.04■■□□□ 1.76
SNED1Q8TER0 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC26.04■■□□□ 1.76
SNED1Q8TER0 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC26.04■■□□□ 1.76
SNED1Q8TER0 AC142381.4-202ENST00000563973 229 ntBASIC26.04■■□□□ 1.76
SNED1Q8TER0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC26.04■■□□□ 1.76
SNED1Q8TER0 AC073648.6-201ENST00000641589 218 ntBASIC26.04■■□□□ 1.76
SNED1Q8TER0 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC26.03■■□□□ 1.76
SNED1Q8TER0 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SNED1Q8TER0 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC26.03■■□□□ 1.76
SNED1Q8TER0 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC26.03■■□□□ 1.76
SNED1Q8TER0 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
SNED1Q8TER0 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC26.03■■□□□ 1.76
SNED1Q8TER0 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC26.03■■□□□ 1.76
SNED1Q8TER0 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC26.03■■□□□ 1.76
SNED1Q8TER0 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
SNED1Q8TER0 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC26.03■■□□□ 1.76
SNED1Q8TER0 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC26.03■■□□□ 1.76
SNED1Q8TER0 AL359710.1-201ENST00000427039 1544 ntTSL 2 BASIC26.03■■□□□ 1.76
SNED1Q8TER0 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
SNED1Q8TER0 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
SNED1Q8TER0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 PLPP7-201ENST00000372261 972 ntTSL 2 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 AP003097.1-201ENST00000530657 1135 ntBASIC26.02■■□□□ 1.76
SNED1Q8TER0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 USP36-216ENST00000589424 970 ntTSL 5 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 AC008403.3-201ENST00000598924 454 ntBASIC26.02■■□□□ 1.76
SNED1Q8TER0 HAUS4-203ENST00000347758 1428 ntTSL 2 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC26.02■■□□□ 1.76
SNED1Q8TER0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNED1Q8TER0 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNED1Q8TER0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNED1Q8TER0 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNED1Q8TER0 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC26.01■■□□□ 1.75
SNED1Q8TER0 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
SNED1Q8TER0 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNED1Q8TER0 POU5F1P4-201ENST00000413175 1085 ntBASIC26.01■■□□□ 1.75
SNED1Q8TER0 RPS2P4-201ENST00000476944 856 ntBASIC26.01■■□□□ 1.75
SNED1Q8TER0 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC26.01■■□□□ 1.75
SNED1Q8TER0 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC26.01■■□□□ 1.75
SNED1Q8TER0 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC26.01■■□□□ 1.75
SNED1Q8TER0 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC26.01■■□□□ 1.75
SNED1Q8TER0 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
SNED1Q8TER0 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
SNED1Q8TER0 CD6-203ENST00000352009 1809 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
SNED1Q8TER0 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC26■■□□□ 1.75
SNED1Q8TER0 OR2A1-AS1-201ENST00000462305 773 ntBASIC26■■□□□ 1.75
SNED1Q8TER0 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC26■■□□□ 1.75
SNED1Q8TER0 UNC93B4-201ENST00000505679 747 ntBASIC26■■□□□ 1.75
SNED1Q8TER0 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC26■■□□□ 1.75
SNED1Q8TER0 CD44-222ENST00000526025 1052 ntTSL 2 BASIC26■■□□□ 1.75
SNED1Q8TER0 AL591742.1-201ENST00000604433 565 ntBASIC26■■□□□ 1.75
SNED1Q8TER0 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC26■■□□□ 1.75
SNED1Q8TER0 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC26■■□□□ 1.75
SNED1Q8TER0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms