Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 USP25-203ENST00000351097 2158 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC14.51□□□□□ -0.09
ALMS1Q8TCU4 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 SCO2-201ENST00000252785 992 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 LSM12P1-201ENST00000411836 588 ntBASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 CIRBP-211ENST00000586773 942 ntAPPRIS ALT1 TSL 2 BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 GGA2-211ENST00000567468 1713 ntTSL 2 BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 KRT16P2-201ENST00000414673 1423 ntBASIC14.5□□□□□ -0.09
ALMS1Q8TCU4 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 CYYR1-202ENST00000400043 735 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 SPIB-206ENST00000596074 847 ntTSL 2 BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 SRPK3-205ENST00000393786 1900 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC14.49□□□□□ -0.09
ALMS1Q8TCU4 ETHE1-201ENST00000292147 963 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 CALM1-202ENST00000447653 1104 ntAPPRIS ALT1 TSL 2 BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 ALG1-202ENST00000544428 1419 ntTSL 2 BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 HLA-B-256ENST00000639848 1089 ntBASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 RABL6-202ENST00000357466 1820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 RN7SL850P-201ENST00000579959 291 ntBASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
ALMS1Q8TCU4 SIX2-201ENST00000303077 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 ZNF598-202ENST00000562103 2717 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 ALDH6A1-201ENST00000350259 1869 ntAPPRIS ALT2 TSL 2 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 LINC01960-201ENST00000563759 1884 ntBASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 DGCR6-201ENST00000331444 1214 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 WDR88-203ENST00000592765 651 ntTSL 5 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 MED17-227ENST00000640521 2047 ntTSL 5 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 C11orf63-201ENST00000227349 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 OR7E47P-201ENST00000546390 1422 ntBASIC14.47□□□□□ -0.09
ALMS1Q8TCU4 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 AC114730.2-201ENST00000417267 668 ntTSL 3 BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 C22orf34-203ENST00000405854 1593 ntTSL 5 BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 KCNG1-201ENST00000371571 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 HOMER2-201ENST00000304231 1990 ntAPPRIS P4 TSL 5 BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 PNMA6B-201ENST00000538162 1200 ntBASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 DAZAP1-205ENST00000587079 2086 ntAPPRIS ALT1 TSL 5 BASIC14.46□□□□□ -0.09
ALMS1Q8TCU4 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC14.46□□□□□ -0.1
ALMS1Q8TCU4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms