Protein–RNA interactions for Protein: Q8NDH2

CCDC168, Coiled-coil domain-containing protein 168, humanhuman

Predictions only

Length 2,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC168Q8NDH2 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 FOXN3-209ENST00000555353 1595 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 RBM17P2-201ENST00000616397 1405 ntBASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 AC233702.5-201ENST00000584107 538 ntBASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 SLC26A5-209ENST00000393735 1947 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
CCDC168Q8NDH2 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.46
CCDC168Q8NDH2 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 FDX2-202ENST00000393708 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 POU5F1P4-201ENST00000413175 1085 ntBASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 KRT17P2-201ENST00000300992 1314 ntBASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 NFIX-205ENST00000585575 1485 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 APBA3-201ENST00000316757 2075 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 FAM72A-203ENST00000367129 676 ntTSL 3 BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 FAM72A-205ENST00000468509 629 ntTSL 5 BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 EEF1DP3-203ENST00000566025 782 ntBASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
CCDC168Q8NDH2 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 HOXA11-AS-204ENST00000522674 1549 ntTSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 SOX15-203ENST00000570788 1093 ntBASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 MIR4785-201ENST00000585005 73 ntBASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 BRWD1-AS2-201ENST00000603064 1028 ntBASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 KRT16P2-201ENST00000414673 1423 ntBASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 C4orf19-202ENST00000381980 1943 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 TMEM53-205ENST00000372244 1472 ntTSL 2 BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 ESR2-202ENST00000341099 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 C2orf69P4-201ENST00000565394 541 ntBASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 ADAD2-202ENST00000315906 1995 ntAPPRIS ALT2 TSL 1 (best) BASIC17.88■□□□□ 0.45
CCDC168Q8NDH2 PDIA2-201ENST00000219406 1698 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 CBWD3-202ENST00000377342 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 TSEN34-201ENST00000302937 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 AL162258.1-201ENST00000497086 753 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 TMEM175-212ENST00000508204 1399 ntTSL 3 BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.87■□□□□ 0.45
CCDC168Q8NDH2 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 KRT17P1-201ENST00000399211 1546 ntBASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 CMTM7-202ENST00000349718 1214 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 ISG20-202ENST00000379224 540 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 AL591742.1-201ENST00000604433 565 ntBASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 ADAP2-204ENST00000580525 1598 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 RUNDC3A-202ENST00000426726 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 AC087499.1-201ENST00000418141 1075 ntBASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 AC060766.5-201ENST00000590539 871 ntBASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 CD177P1-201ENST00000606252 935 ntBASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 AP001412.1-201ENST00000608405 714 ntBASIC17.86■□□□□ 0.45
CCDC168Q8NDH2 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
CCDC168Q8NDH2 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC168Q8NDH2 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC168Q8NDH2 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC168Q8NDH2 TSPY7P-201ENST00000431358 1114 ntBASIC17.85■□□□□ 0.45
CCDC168Q8NDH2 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC168Q8NDH2 NOXO1-205ENST00000566005 1144 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC168Q8NDH2 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC17.85■□□□□ 0.45
CCDC168Q8NDH2 HAUS4-205ENST00000541587 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
CCDC168Q8NDH2 ACBD4-214ENST00000591859 1998 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms