Protein–RNA interactions for Protein: Q8NCS7

SLC44A5, Choline transporter-like protein 5, humanhuman

Predictions only

Length 719 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A5Q8NCS7 CITED2-202ENST00000536159 1797 ntAPPRIS P1 TSL 3 BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 CITED2-203ENST00000537332 1780 ntTSL 3 BASIC25.07■■□□□ 1.6
SLC44A5Q8NCS7 AC010542.4-201ENST00000563151 1910 ntBASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 KRT18P20-201ENST00000548986 1279 ntBASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 ABCC6-204ENST00000575728 714 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 AC010536.3-201ENST00000620306 533 ntBASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 LRP5L-203ENST00000444995 1714 ntAPPRIS ALT2 TSL 5 BASIC25.06■■□□□ 1.6
SLC44A5Q8NCS7 FAM99A-202ENST00000538190 1989 ntBASIC25.05■■□□□ 1.6
SLC44A5Q8NCS7 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
SLC44A5Q8NCS7 PIGP-203ENST00000399098 972 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC44A5Q8NCS7 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC25.05■■□□□ 1.6
SLC44A5Q8NCS7 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC25.05■■□□□ 1.6
SLC44A5Q8NCS7 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC25.05■■□□□ 1.6
SLC44A5Q8NCS7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC44A5Q8NCS7 UPF3A-201ENST00000351487 2235 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC44A5Q8NCS7 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC25.05■■□□□ 1.6
SLC44A5Q8NCS7 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 NCF1B-203ENST00000435988 1254 ntBASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 TSPAN3-202ENST00000346495 1647 ntTSL 2 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 ZNF584-203ENST00000593920 2187 ntTSL 2 BASIC25.04■■□□□ 1.6
SLC44A5Q8NCS7 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 AC233723.2-201ENST00000623798 2106 ntBASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 RARG-204ENST00000543726 1779 ntTSL 2 BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC25.03■■□□□ 1.6
SLC44A5Q8NCS7 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 MXRA8-203ENST00000445648 2001 ntTSL 2 BASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 FAM207A-201ENST00000291634 927 ntAPPRIS P3 TSL 1 (best) BASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 AC007322.1-201ENST00000426983 750 ntBASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 AC005181.1-201ENST00000604782 1256 ntBASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 AC231657.2-201ENST00000624556 255 ntBASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 PNLIPRP2-204ENST00000591655 1456 ntAPPRIS ALT1 TSL 5 BASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.02■■□□□ 1.6
SLC44A5Q8NCS7 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SLC44A5Q8NCS7 AC061975.6-201ENST00000579045 1553 ntBASIC25.01■■□□□ 1.59
SLC44A5Q8NCS7 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC25.01■■□□□ 1.59
SLC44A5Q8NCS7 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SLC44A5Q8NCS7 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC25.01■■□□□ 1.59
SLC44A5Q8NCS7 AL109923.1-201ENST00000618799 583 ntBASIC25.01■■□□□ 1.59
SLC44A5Q8NCS7 ANKRD44-204ENST00000409919 1622 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SLC44A5Q8NCS7 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC25.01■■□□□ 1.59
SLC44A5Q8NCS7 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SLC44A5Q8NCS7 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 GUSBP5-202ENST00000510805 1989 ntBASIC25■■□□□ 1.59
SLC44A5Q8NCS7 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC25■■□□□ 1.59
SLC44A5Q8NCS7 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC24.99■■□□□ 1.59
SLC44A5Q8NCS7 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SLC44A5Q8NCS7 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC24.99■■□□□ 1.59
SLC44A5Q8NCS7 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC24.99■■□□□ 1.59
SLC44A5Q8NCS7 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC24.99■■□□□ 1.59
SLC44A5Q8NCS7 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC24.99■■□□□ 1.59
SLC44A5Q8NCS7 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC24.99■■□□□ 1.59
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms