Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
ARHGEF39Q8N4T4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 YBEY-204ENST00000397692 433 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC20.09■□□□□ 0.81
ARHGEF39Q8N4T4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 ARL6IP4-204ENST00000392435 1339 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 MLNR-201ENST00000218721 1239 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 NAA20-201ENST00000310450 920 ntTSL 2 BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 H1FX-AS1-204ENST00000511998 917 ntTSL 5 BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.08■□□□□ 0.81
ARHGEF39Q8N4T4 GJB6-203ENST00000400065 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.08■□□□□ 0.8
ARHGEF39Q8N4T4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.08■□□□□ 0.8
ARHGEF39Q8N4T4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.08■□□□□ 0.8
ARHGEF39Q8N4T4 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 DTNBP1-201ENST00000338950 1880 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 WT1-AS-205ENST00000494911 1320 ntTSL 4 BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 VPS13B-204ENST00000441350 1626 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 ABHD14A-204ENST00000491470 674 ntTSL 3 BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 AC016888.1-201ENST00000585285 565 ntTSL 3 BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 ADCK2-203ENST00000476491 2092 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 LINC01089-202ENST00000429892 1521 ntTSL 1 (best) BASIC20.07■□□□□ 0.8
ARHGEF39Q8N4T4 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 MPST-202ENST00000397225 2116 ntAPPRIS P1 TSL 2 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 PIAS2-203ENST00000545673 1590 ntTSL 2 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 KRT18P20-201ENST00000548986 1279 ntBASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 UBE2DNL-204ENST00000602536 740 ntBASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 ME2-206ENST00000638410 2289 ntTSL 5 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 ME2-210ENST00000639255 2262 ntTSL 5 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.06■□□□□ 0.8
ARHGEF39Q8N4T4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 FAM19A5-202ENST00000358295 2638 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 AC004911.1-201ENST00000416316 871 ntBASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 DLX3-202ENST00000512495 834 ntTSL 2 BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 AC044860.1-203ENST00000560811 844 ntTSL 3 BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 UBE2Q2P2-204ENST00000618775 648 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
ARHGEF39Q8N4T4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARHGEF39Q8N4T4 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
ARHGEF39Q8N4T4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.04■□□□□ 0.8
ARHGEF39Q8N4T4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.04■□□□□ 0.8
ARHGEF39Q8N4T4 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
ARHGEF39Q8N4T4 TYMP-202ENST00000395678 1614 ntAPPRIS P3 TSL 1 (best) BASIC20.04■□□□□ 0.8
ARHGEF39Q8N4T4 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.04■□□□□ 0.8
ARHGEF39Q8N4T4 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
Retrieved 100 of 98,524 protein–RNA pairs in 20.6 ms