Protein–RNA interactions for Protein: Q8N3V7

SYNPO, Synaptopodin, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPOQ8N3V7 PHB2-213ENST00000546111 858 ntTSL 2 BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 AC003102.1-201ENST00000588279 569 ntTSL 4 BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 AC008175.2-201ENST00000612840 297 ntBASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 DTNB-206ENST00000404103 2384 ntAPPRIS ALT2 TSL 5 BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 RAX-201ENST00000256852 2935 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
SYNPOQ8N3V7 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 ASIP-201ENST00000374954 586 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 LINC01191-201ENST00000412690 844 ntTSL 2 BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 AL162412.1-201ENST00000567129 965 ntBASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC21.61■■□□□ 1.05
SYNPOQ8N3V7 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 POU5F1P4-201ENST00000413175 1085 ntBASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 ZNF324-202ENST00000535298 1006 ntTSL 5 BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 PLLP-204ENST00000569059 665 ntTSL 3 BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
SYNPOQ8N3V7 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPOQ8N3V7 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC21.59■■□□□ 1.05
SYNPOQ8N3V7 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPOQ8N3V7 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC21.59■■□□□ 1.05
SYNPOQ8N3V7 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
SYNPOQ8N3V7 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC21.59■■□□□ 1.05
SYNPOQ8N3V7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC21.59■■□□□ 1.05
SYNPOQ8N3V7 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC21.59■■□□□ 1.05
SYNPOQ8N3V7 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
SYNPOQ8N3V7 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC21.59■■□□□ 1.05
SYNPOQ8N3V7 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 LINC00526-201ENST00000581067 1875 ntBASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 DPP7-201ENST00000371579 1590 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 PRORSD1P-201ENST00000295112 541 ntBASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 AC093787.1-201ENST00000450396 207 ntBASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 AC097658.1-201ENST00000475555 843 ntBASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 IRX5-204ENST00000560154 879 ntTSL 5 BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 GDF6-203ENST00000621429 1179 ntTSL 5 BASIC21.58■■□□□ 1.05
SYNPOQ8N3V7 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC21.58■■□□□ 1.04
SYNPOQ8N3V7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SYNPOQ8N3V7 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
SYNPOQ8N3V7 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.04
SYNPOQ8N3V7 FASTK-217ENST00000540185 1609 ntTSL 5 BASIC21.58■■□□□ 1.04
SYNPOQ8N3V7 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 C9orf163-202ENST00000624034 2573 ntBASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 AC016405.3-201ENST00000607710 860 ntBASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 NOXO1-201ENST00000354249 1618 ntTSL 1 (best) BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 FHL3-201ENST00000373016 1647 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.57■■□□□ 1.04
SYNPOQ8N3V7 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC21.56■■□□□ 1.04
SYNPOQ8N3V7 BX276092.2-201ENST00000417668 665 ntBASIC21.56■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 20.7 ms