Protein–RNA interactions for Protein: Q86YS6

RAB43, Ras-related protein Rab-43, humanhuman

Predictions only

Length 212 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB43Q86YS6 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
RAB43Q86YS6 LINC01960-201ENST00000563759 1884 ntBASIC20.18■□□□□ 0.82
RAB43Q86YS6 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.18■□□□□ 0.82
RAB43Q86YS6 MESP1-201ENST00000300057 2369 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB43Q86YS6 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB43Q86YS6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB43Q86YS6 RASSF10-201ENST00000529419 2530 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
RAB43Q86YS6 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
RAB43Q86YS6 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.17■□□□□ 0.82
RAB43Q86YS6 HLA-L-209ENST00000420110 1011 ntBASIC20.17■□□□□ 0.82
RAB43Q86YS6 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB43Q86YS6 ZNF717-203ENST00000477374 1169 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB43Q86YS6 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB43Q86YS6 AC079089.2-201ENST00000531211 1277 ntBASIC20.17■□□□□ 0.82
RAB43Q86YS6 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.17■□□□□ 0.82
RAB43Q86YS6 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
RAB43Q86YS6 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB43Q86YS6 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB43Q86YS6 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB43Q86YS6 CPNE2-201ENST00000290776 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
RAB43Q86YS6 MAIP1-201ENST00000295079 1495 ntAPPRIS P2 TSL 2 BASIC20.17■□□□□ 0.82
RAB43Q86YS6 KLC3-204ENST00000585434 1764 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB43Q86YS6 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB43Q86YS6 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB43Q86YS6 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC20.16■□□□□ 0.82
RAB43Q86YS6 B3GALNT2-202ENST00000366600 2015 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB43Q86YS6 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
RAB43Q86YS6 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB43Q86YS6 ABHD14A-202ENST00000458031 1113 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB43Q86YS6 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB43Q86YS6 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC20.16■□□□□ 0.82
RAB43Q86YS6 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB43Q86YS6 RAB3A-201ENST00000222256 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB43Q86YS6 DACT2-203ENST00000607983 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
RAB43Q86YS6 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB43Q86YS6 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
RAB43Q86YS6 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB43Q86YS6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB43Q86YS6 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RAB43Q86YS6 AC006970.2-201ENST00000450065 779 ntBASIC20.15■□□□□ 0.82
RAB43Q86YS6 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC20.15■□□□□ 0.82
RAB43Q86YS6 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB43Q86YS6 KLK9-202ENST00000594211 754 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB43Q86YS6 AC012313.6-201ENST00000599889 790 ntTSL 3 BASIC20.15■□□□□ 0.82
RAB43Q86YS6 RAP2CP1-201ENST00000605103 478 ntBASIC20.15■□□□□ 0.82
RAB43Q86YS6 MDK-213ENST00000617138 635 ntTSL 2 BASIC20.15■□□□□ 0.82
RAB43Q86YS6 AC011767.1-201ENST00000617410 1153 ntBASIC20.15■□□□□ 0.82
RAB43Q86YS6 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC20.15■□□□□ 0.82
RAB43Q86YS6 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB43Q86YS6 GOLGA6L9-202ENST00000618348 1710 ntAPPRIS P1 TSL 5 BASIC20.15■□□□□ 0.82
RAB43Q86YS6 MFSD7-203ENST00000404286 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB43Q86YS6 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB43Q86YS6 PPT2-248ENST00000395523 2111 ntAPPRIS ALT2 TSL 5 BASIC20.15■□□□□ 0.82
RAB43Q86YS6 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB43Q86YS6 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB43Q86YS6 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
RAB43Q86YS6 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.15■□□□□ 0.82
RAB43Q86YS6 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
RAB43Q86YS6 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB43Q86YS6 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB43Q86YS6 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB43Q86YS6 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB43Q86YS6 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB43Q86YS6 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC20.14■□□□□ 0.81
RAB43Q86YS6 MCRIP1-204ENST00000570507 765 ntTSL 2 BASIC20.14■□□□□ 0.81
RAB43Q86YS6 MCRIP1-208ENST00000575061 618 ntTSL 5 BASIC20.14■□□□□ 0.81
RAB43Q86YS6 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
RAB43Q86YS6 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
RAB43Q86YS6 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
RAB43Q86YS6 KIF12-202ENST00000468460 2162 ntAPPRIS ALT2 TSL 5 BASIC20.14■□□□□ 0.81
RAB43Q86YS6 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB43Q86YS6 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB43Q86YS6 ALKBH7-201ENST00000245812 1332 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB43Q86YS6 UTF1-201ENST00000304477 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB43Q86YS6 DCTN3-202ENST00000341694 899 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB43Q86YS6 SLC22A15-201ENST00000369502 1230 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB43Q86YS6 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RAB43Q86YS6 DCTN3-205ENST00000378916 773 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB43Q86YS6 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RAB43Q86YS6 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB43Q86YS6 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB43Q86YS6 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC20.13■□□□□ 0.81
RAB43Q86YS6 AC104187.1-201ENST00000607510 612 ntBASIC20.13■□□□□ 0.81
RAB43Q86YS6 GXYLT1P5-201ENST00000614548 1189 ntBASIC20.13■□□□□ 0.81
RAB43Q86YS6 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB43Q86YS6 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.13■□□□□ 0.81
RAB43Q86YS6 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB43Q86YS6 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RAB43Q86YS6 SH2B1-204ENST00000395532 2529 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RAB43Q86YS6 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC20.13■□□□□ 0.81
RAB43Q86YS6 GSTM3-202ENST00000361066 1565 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB43Q86YS6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB43Q86YS6 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB43Q86YS6 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB43Q86YS6 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB43Q86YS6 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.12■□□□□ 0.81
RAB43Q86YS6 AC025164.2-201ENST00000501008 1898 ntTSL 5 BASIC20.12■□□□□ 0.81
RAB43Q86YS6 EFNA2-201ENST00000215368 949 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RAB43Q86YS6 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RAB43Q86YS6 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 17.5 ms