Protein–RNA interactions for Protein: Q86VH5

LRRTM3, Leucine-rich repeat transmembrane neuronal protein 3, humanhuman

Predictions only

Length 581 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM3Q86VH5 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.19
LRRTM3Q86VH5 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC22.45■■□□□ 1.19
LRRTM3Q86VH5 PHLDB2-210ENST00000478922 1861 ntTSL 1 (best) BASIC22.45■■□□□ 1.19
LRRTM3Q86VH5 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LRRTM3Q86VH5 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRTM3Q86VH5 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRTM3Q86VH5 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRTM3Q86VH5 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC22.45■■□□□ 1.18
LRRTM3Q86VH5 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC22.45■■□□□ 1.18
LRRTM3Q86VH5 AP005205.2-201ENST00000577327 491 ntTSL 2 BASIC22.45■■□□□ 1.18
LRRTM3Q86VH5 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.45■■□□□ 1.18
LRRTM3Q86VH5 GUSBP5-202ENST00000510805 1989 ntBASIC22.45■■□□□ 1.18
LRRTM3Q86VH5 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
LRRTM3Q86VH5 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 TOR2A-201ENST00000336067 1370 ntTSL 2 BASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 UQCRFS1P1-201ENST00000435169 820 ntBASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 AC242852.2-201ENST00000615738 1807 ntBASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC22.44■■□□□ 1.18
LRRTM3Q86VH5 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 SPAST-204ENST00000621856 1715 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 MIR663A-201ENST00000385250 93 ntBASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 CNN2P6-201ENST00000439038 900 ntBASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 SLC7A5P1-201ENST00000568957 537 ntBASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 NDUFA6-AS1-207ENST00000595777 833 ntTSL 5 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 AL050303.2-201ENST00000619798 666 ntBASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 AC010536.3-201ENST00000620306 533 ntBASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 PLEKHA8-208ENST00000622102 2140 ntTSL 5 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 NAA35-202ENST00000376040 1797 ntTSL 2 BASIC22.43■■□□□ 1.18
LRRTM3Q86VH5 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 AVPI1-201ENST00000370626 1457 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 ANKRD54-201ENST00000215941 2184 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 IL17RE-201ENST00000383814 2704 ntAPPRIS P2 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 KHDC3L-201ENST00000370367 1018 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 AC006970.2-201ENST00000450065 779 ntBASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 MFSD14C-203ENST00000602917 786 ntAPPRIS P5 TSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 ATP8A1-207ENST00000510289 2238 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 H2AFX-202ENST00000530167 1614 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
LRRTM3Q86VH5 RBBP7-202ENST00000380084 2036 ntTSL 2 BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 CREB3L3-202ENST00000595923 1491 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 NCF1B-203ENST00000435988 1254 ntBASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 AC231657.2-201ENST00000624556 255 ntBASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 PARP1-210ENST00000629232 477 ntTSL 5 BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 COCH-205ENST00000475087 1997 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 AC061975.6-201ENST00000579045 1553 ntBASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 OSR2-210ENST00000523368 1519 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
LRRTM3Q86VH5 BMP2K-204ENST00000502871 3195 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 AC007322.1-201ENST00000426983 750 ntBASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 LOXL1-AS1-208ENST00000565756 885 ntTSL 2 BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 ARL13B-205ENST00000471138 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LRRTM3Q86VH5 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC22.39■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms