Protein–RNA interactions for Protein: Q86VH4

LRRTM4, Leucine-rich repeat transmembrane neuronal protein 4, humanhuman

Predictions only

Length 590 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4Q86VH4 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
LRRTM4Q86VH4 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 HRASLS5-201ENST00000301790 1166 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 CPED1-202ENST00000340646 1056 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 KRT18P11-201ENST00000435214 1283 ntBASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 ATP6V0B-205ENST00000472174 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 AC106820.5-201ENST00000566085 789 ntTSL 3 BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 PACRGL-208ENST00000503585 1582 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 CCDC106-207ENST00000591578 1592 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 MRPL37-206ENST00000605337 1582 ntTSL 5 BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 CNIH2-201ENST00000311445 1356 ntAPPRIS P2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 NKX2-4-201ENST00000351817 2238 ntAPPRIS P1 TSL 5 BASIC20.84■□□□□ 0.93
LRRTM4Q86VH4 LIMS2-202ENST00000355119 2045 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRTM4Q86VH4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRRTM4Q86VH4 WHAMM-201ENST00000286760 5101 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRTM4Q86VH4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRTM4Q86VH4 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRTM4Q86VH4 ACAA1-202ENST00000333167 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRTM4Q86VH4 AC004911.1-201ENST00000416316 871 ntBASIC20.83■□□□□ 0.93
LRRTM4Q86VH4 GRPEL2-202ENST00000416916 1006 ntTSL 2 BASIC20.83■□□□□ 0.93
LRRTM4Q86VH4 SMIM12-202ENST00000423898 897 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LRRTM4Q86VH4 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRRTM4Q86VH4 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC20.83■□□□□ 0.92
LRRTM4Q86VH4 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRTM4Q86VH4 PSMD7-201ENST00000219313 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRRTM4Q86VH4 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC20.83■□□□□ 0.92
LRRTM4Q86VH4 C11orf96-202ENST00000528572 1834 ntBASIC20.83■□□□□ 0.92
LRRTM4Q86VH4 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 C10orf95-201ENST00000625129 1469 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 ASRGL1-210ENST00000534571 639 ntTSL 2 BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 SNAP23-214ENST00000567094 834 ntTSL 3 BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 PEX10-202ENST00000447513 1997 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 MRAS-202ENST00000423968 1803 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 CXCL16-203ENST00000574412 1668 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRRTM4Q86VH4 GABBR2-201ENST00000259455 5788 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 MRPL37-201ENST00000336230 1179 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 LINC01816-201ENST00000414141 662 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 KRT18P20-201ENST00000548986 1279 ntBASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 IMPA2-212ENST00000625802 500 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 WWOX-218ENST00000627394 894 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 CHST7-201ENST00000276055 2289 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 B4GALNT1-203ENST00000449184 1633 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 OIP5-AS1-202ENST00000501665 1384 ntTSL 2 BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 ASAP2-201ENST00000281419 5712 ntAPPRIS P3 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 LSR-204ENST00000361790 2210 ntAPPRIS P4 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
LRRTM4Q86VH4 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 OLFM1-206ENST00000371799 961 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 C19orf24-201ENST00000409293 983 ntAPPRIS P1 TSL 2 BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 SPI1-203ENST00000533030 661 ntTSL 2 BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 AC008175.2-201ENST00000612840 297 ntBASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 TRIM2-212ENST00000632856 656 ntTSL 3 BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 AL032819.3-201ENST00000640283 925 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC20.8■□□□□ 0.92
LRRTM4Q86VH4 CREG1-201ENST00000370509 1974 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 CYB5R4-201ENST00000369679 768 ntTSL 3 BASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 UBE2DNL-204ENST00000602536 740 ntBASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 RNASEH2B-206ENST00000611510 1257 ntTSL 5 BASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 GAS2L1P2-201ENST00000436355 1356 ntBASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 TMEM25-205ENST00000411589 2442 ntAPPRIS ALT2 TSL 2 BASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
LRRTM4Q86VH4 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRRTM4Q86VH4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC20.78■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms