Protein–RNA interactions for Protein: Q86UE6

LRRTM1, Leucine-rich repeat transmembrane neuronal protein 1, humanhuman

Predictions only

Length 522 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1Q86UE6 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
LRRTM1Q86UE6 IRF7-204ENST00000397570 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 SYT7-206ENST00000540677 2013 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 MAGI2-AS3-201ENST00000414797 1072 ntTSL 2 BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 WWTR1-AS1-202ENST00000479752 1700 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 GCH1-202ENST00000395514 1977 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
LRRTM1Q86UE6 B3GAT3-202ENST00000531383 2056 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 C2CD4B-201ENST00000380392 1579 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 AC003102.1-202ENST00000563394 1796 ntBASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 OR2I1P-207ENST00000453522 948 ntBASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 AC010141.3-201ENST00000456659 717 ntBASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 MIR6724-1-201ENST00000616420 92 ntBASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 MIR6724-2-201ENST00000616483 92 ntBASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 MIR6724-4-201ENST00000617390 92 ntBASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 MIR6724-3-201ENST00000622482 92 ntBASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 HSD11B1L-218ENST00000581773 1687 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
LRRTM1Q86UE6 GRINA-202ENST00000395068 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 LYPD1-202ENST00000397463 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 WDSUB1-202ENST00000359774 1912 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 AC087239.1-201ENST00000622671 572 ntBASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 HMBS-201ENST00000278715 1501 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 ALG1-201ENST00000262374 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC18.37■□□□□ 0.53
LRRTM1Q86UE6 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 NEUROG1-201ENST00000314744 1668 ntAPPRIS P1 BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 QPCT-201ENST00000338415 1739 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 C17orf67-201ENST00000397861 2013 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 HNRNPLL-204ENST00000409328 1908 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 TRABD2A-203ENST00000409520 1975 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 BASP1-203ENST00000616743 1711 ntAPPRIS P1 TSL 3 BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC18.36■□□□□ 0.53
LRRTM1Q86UE6 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 MGAT4D-208ENST00000515354 1806 ntTSL 3 BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 NR1H2-204ENST00000593926 1828 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 TMEM178A-201ENST00000281961 1662 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 EVA1B-201ENST00000270824 1054 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 MIR3181-201ENST00000578512 73 ntBASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 AC099791.2-201ENST00000605725 427 ntBASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 PICSAR-201ENST00000615826 733 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
LRRTM1Q86UE6 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 TST-201ENST00000249042 1211 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 TSPAN17-204ENST00000503045 1019 ntTSL 5 BASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 AL034346.1-201ENST00000568244 1277 ntBASIC18.34■□□□□ 0.53
LRRTM1Q86UE6 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 22.1 ms