Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4DQ86TL0 PXYLP1-203ENST00000502783 2066 ntTSL 2 BASIC19.26■□□□□ 0.67
ATG4DQ86TL0 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC19.26■□□□□ 0.67
ATG4DQ86TL0 SOS2-201ENST00000216373 5498 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4DQ86TL0 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
ATG4DQ86TL0 HLA-C-201ENST00000376228 1536 ntAPPRIS P2 BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 ELOA3B-201ENST00000611323 1641 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 ELOA3D-201ENST00000620881 1641 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 PDCD2-203ENST00000443345 1897 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 EFS-203ENST00000429593 2610 ntTSL 2 BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 RUSC1-AS1-203ENST00000450199 1636 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
ATG4DQ86TL0 FEM1AP4-201ENST00000443167 1987 ntBASIC19.24■□□□□ 0.67
ATG4DQ86TL0 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 IFNGR2-203ENST00000405436 1684 ntTSL 5 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 VGLL4-208ENST00000424529 1025 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 FAM66D-201ENST00000434078 918 ntTSL 5 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 AC011446.1-201ENST00000591825 458 ntTSL 2 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 MIR6821-201ENST00000617625 74 ntBASIC19.24■□□□□ 0.67
ATG4DQ86TL0 PBX4-201ENST00000251203 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 PPP3CC-203ENST00000397775 2094 ntTSL 2 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 DUSP2-201ENST00000288943 1688 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 AC133555.3-201ENST00000549950 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 AC106782.1-201ENST00000550538 1693 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 AC009014.1-201ENST00000607574 1667 ntAPPRIS P1 BASIC19.24■□□□□ 0.67
ATG4DQ86TL0 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 PRR20B-201ENST00000377930 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 PRR20A-201ENST00000377931 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 PRR20E-201ENST00000434815 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 PRR20D-201ENST00000452123 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 PRR20C-201ENST00000544357 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 PRR20C-202ENST00000614894 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 RAB24-202ENST00000303270 1385 ntTSL 2 BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 AC097381.1-201ENST00000429019 1296 ntBASIC19.23■□□□□ 0.67
ATG4DQ86TL0 AL355877.1-204ENST00000451482 1078 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 PRKCQ-AS1-204ENST00000455810 920 ntTSL 2 BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 AC116614.1-201ENST00000456949 539 ntTSL 2 BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 AC005775.1-201ENST00000592413 850 ntTSL 5 BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 MIR5787-201ENST00000611784 55 ntBASIC19.23■□□□□ 0.67
ATG4DQ86TL0 ANKRD20A6P-201ENST00000618763 204 ntBASIC19.23■□□□□ 0.67
ATG4DQ86TL0 AL358852.1-201ENST00000623174 1268 ntBASIC19.23■□□□□ 0.67
ATG4DQ86TL0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 PHF10-202ENST00000366780 1589 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 TMEM8B-203ENST00000377996 2473 ntTSL 2 BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC19.23■□□□□ 0.67
ATG4DQ86TL0 SLC1A6-203ENST00000544886 2420 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 C1QL1-201ENST00000253407 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 HBM-201ENST00000356815 506 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 CD55-205ENST00000367067 1843 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 DYM-203ENST00000442713 2147 ntTSL 2 BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
ATG4DQ86TL0 AC005229.4-201ENST00000610085 2198 ntBASIC19.22■□□□□ 0.67
ATG4DQ86TL0 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 FXN-202ENST00000396364 980 ntTSL 5 BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 RORB-AS1-201ENST00000417576 1178 ntTSL 5 BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 ECHDC2-221ENST00000536120 1446 ntTSL 3 BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 TPRG1LP1-201ENST00000598702 760 ntBASIC19.21■□□□□ 0.67
ATG4DQ86TL0 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 NOXA1-202ENST00000392815 1464 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ATG4DQ86TL0 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC19.2■□□□□ 0.66
ATG4DQ86TL0 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ATG4DQ86TL0 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ATG4DQ86TL0 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 60.3 ms