Protein–RNA interactions for Protein: Q7Z398

ZNF550, Zinc finger protein 550, humanhuman

Predictions only

Length 422 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF550Q7Z398 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF550Q7Z398 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC19.51■□□□□ 0.71
ZNF550Q7Z398 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF550Q7Z398 LMAN2-201ENST00000303127 1800 ntAPPRIS P2 TSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF550Q7Z398 MFF-203ENST00000349901 1716 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF550Q7Z398 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.51■□□□□ 0.71
ZNF550Q7Z398 AVPR2-203ENST00000370049 1307 ntTSL 1 (best) BASIC19.51■□□□□ 0.71
ZNF550Q7Z398 EXOG-203ENST00000422077 1317 ntTSL 2 BASIC19.51■□□□□ 0.71
ZNF550Q7Z398 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 CCNL1-203ENST00000461804 1998 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 FBXO25-202ENST00000350302 2229 ntAPPRIS ALT1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 AC097381.1-201ENST00000429019 1296 ntBASIC19.5■□□□□ 0.71
ZNF550Q7Z398 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 HERC2P4-206ENST00000568097 1062 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 AC006538.2-201ENST00000586572 543 ntAPPRIS P1 TSL 4 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 AC012313.1-203ENST00000597980 570 ntTSL 4 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 DOK3-202ENST00000357198 1729 ntTSL 2 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 AC009237.3-201ENST00000393279 1427 ntBASIC19.5■□□□□ 0.71
ZNF550Q7Z398 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 KLHL17-205ENST00000622660 1950 ntTSL 5 BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.5■□□□□ 0.71
ZNF550Q7Z398 CBWD6-201ENST00000377391 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 ASL-203ENST00000380839 1765 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 AC003102.1-202ENST00000563394 1796 ntBASIC19.49■□□□□ 0.71
ZNF550Q7Z398 RANBP10-202ENST00000448631 2232 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 AL590128.2-201ENST00000442889 415 ntTSL 3 BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 ATP6V0B-204ENST00000471859 865 ntTSL 5 BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 ZFYVE28-207ENST00000509171 1135 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 OTUB1-212ENST00000543988 1259 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 PLD4-205ENST00000553861 667 ntTSL 2 BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 H2AFY-217ENST00000511689 2789 ntAPPRIS P4 TSL 1 (best) BASIC19.49■□□□□ 0.71
ZNF550Q7Z398 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 ST3GAL3-207ENST00000353126 1969 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 PXK-211ENST00000484288 2031 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 ZNF511-202ENST00000361518 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 NDUFB2-212ENST00000476279 1666 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 CDKN2C-203ENST00000396148 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 TMEM9B-205ENST00000534025 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 VGF-202ENST00000445482 2477 ntAPPRIS P1 TSL 5 BASIC19.48■□□□□ 0.71
ZNF550Q7Z398 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 TANGO2-212ENST00000434570 2180 ntTSL 2 BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 ZIM2-201ENST00000593711 2083 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 RPL8-201ENST00000262584 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 PCMT1-201ENST00000367378 1293 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 MIR572-201ENST00000384983 95 ntBASIC19.47■□□□□ 0.71
ZNF550Q7Z398 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 AC010203.1-202ENST00000550096 695 ntTSL 3 BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 SP2-202ENST00000613139 908 ntTSL 5 BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 C19orf12-201ENST00000323670 2464 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
ZNF550Q7Z398 FBXL14-201ENST00000339235 2111 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 SMPD5-201ENST00000528912 1390 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 PPP1R3F-203ENST00000466508 1885 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 ABHD12B-201ENST00000337334 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 AC079328.2-202ENST00000560903 1410 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 NDUFB2-201ENST00000247866 504 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 ANKRD63-201ENST00000434396 1143 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 SCN1B-206ENST00000638536 1600 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 DACT1-204ENST00000541264 2610 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 PSIP1-201ENST00000380715 1966 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 C11orf96-201ENST00000339446 1308 ntTSL 5 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 GRTP1-202ENST00000375430 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 PPP1R12B-212ENST00000480184 1808 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 DTWD2-203ENST00000510708 2307 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC19.46■□□□□ 0.71
ZNF550Q7Z398 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 VRK2-201ENST00000340157 1888 ntAPPRIS P3 TSL 1 (best) BASIC19.45■□□□□ 0.7
ZNF550Q7Z398 ALKAL2-204ENST00000403610 1389 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 31.4 ms