Protein–RNA interactions for Protein: Q7M4L6

SHF, SH2 domain-containing adapter protein F, humanhuman

Predictions only

Length 423 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHFQ7M4L6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
SHFQ7M4L6 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHFQ7M4L6 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHFQ7M4L6 RBKS-201ENST00000302188 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHFQ7M4L6 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC19.1■□□□□ 0.65
SHFQ7M4L6 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHFQ7M4L6 AC010336.5-201ENST00000594308 317 ntTSL 3 BASIC19.1■□□□□ 0.65
SHFQ7M4L6 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHFQ7M4L6 TEAD2-210ENST00000601519 2167 ntAPPRIS ALT1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHFQ7M4L6 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHFQ7M4L6 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
SHFQ7M4L6 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHFQ7M4L6 TMEM5-201ENST00000261234 1918 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
SHFQ7M4L6 UBALD1-206ENST00000590965 1462 ntTSL 2 BASIC19.09■□□□□ 0.65
SHFQ7M4L6 CDC14A-203ENST00000370124 1883 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHFQ7M4L6 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHFQ7M4L6 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.09■□□□□ 0.65
SHFQ7M4L6 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHFQ7M4L6 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHFQ7M4L6 CD7-207ENST00000584284 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHFQ7M4L6 SRD5A1P1-201ENST00000442297 786 ntBASIC19.09■□□□□ 0.65
SHFQ7M4L6 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC19.09■□□□□ 0.65
SHFQ7M4L6 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHFQ7M4L6 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.09■□□□□ 0.65
SHFQ7M4L6 AC087239.1-201ENST00000622671 572 ntBASIC19.09■□□□□ 0.65
SHFQ7M4L6 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHFQ7M4L6 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.09■□□□□ 0.65
SHFQ7M4L6 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHFQ7M4L6 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
SHFQ7M4L6 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC19.09■□□□□ 0.65
SHFQ7M4L6 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC19.09■□□□□ 0.65
SHFQ7M4L6 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC19.09■□□□□ 0.65
SHFQ7M4L6 AL121749.1-201ENST00000635993 1768 ntTSL 5 BASIC19.09■□□□□ 0.65
SHFQ7M4L6 CCKBR-206ENST00000532715 1734 ntTSL 3 BASIC19.08■□□□□ 0.65
SHFQ7M4L6 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHFQ7M4L6 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHFQ7M4L6 MAPK9-206ENST00000425491 2266 ntTSL 5 BASIC19.08■□□□□ 0.65
SHFQ7M4L6 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.65
SHFQ7M4L6 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHFQ7M4L6 ACSL1-205ENST00000504900 1583 ntTSL 5 BASIC19.08■□□□□ 0.65
SHFQ7M4L6 MFSD7-209ENST00000515118 1556 ntTSL 5 BASIC19.08■□□□□ 0.65
SHFQ7M4L6 SYNGR2-203ENST00000588282 1553 ntTSL 1 (best) BASIC19.08■□□□□ 0.65
SHFQ7M4L6 DPP10-AS1-201ENST00000432658 730 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHFQ7M4L6 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.08■□□□□ 0.64
SHFQ7M4L6 CCDC189-211ENST00000545825 1046 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHFQ7M4L6 MIR3181-201ENST00000578512 73 ntBASIC19.08■□□□□ 0.64
SHFQ7M4L6 AL117336.3-202ENST00000605499 489 ntTSL 3 BASIC19.08■□□□□ 0.64
SHFQ7M4L6 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC19.08■□□□□ 0.64
SHFQ7M4L6 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC19.08■□□□□ 0.64
SHFQ7M4L6 NAPEPLD-208ENST00000427257 1822 ntAPPRIS P1 TSL 2 BASIC19.08■□□□□ 0.64
SHFQ7M4L6 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHFQ7M4L6 DCTD-202ENST00000438320 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.08■□□□□ 0.64
SHFQ7M4L6 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC19.08■□□□□ 0.64
SHFQ7M4L6 DNAJB5-201ENST00000312316 2391 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHFQ7M4L6 RBM34-201ENST00000408888 2054 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHFQ7M4L6 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.07■□□□□ 0.64
SHFQ7M4L6 POMGNT1-201ENST00000371984 2728 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHFQ7M4L6 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC19.07■□□□□ 0.64
SHFQ7M4L6 PAQR6-215ENST00000623241 1961 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHFQ7M4L6 C9orf47-202ENST00000375850 859 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
SHFQ7M4L6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHFQ7M4L6 OR2I1P-207ENST00000453522 948 ntBASIC19.07■□□□□ 0.64
SHFQ7M4L6 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC19.07■□□□□ 0.64
SHFQ7M4L6 TRIR-205ENST00000592273 783 ntTSL 3 BASIC19.07■□□□□ 0.64
SHFQ7M4L6 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHFQ7M4L6 NARF-202ENST00000345415 1487 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHFQ7M4L6 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
SHFQ7M4L6 AC010616.1-201ENST00000597630 2078 ntAPPRIS P1 TSL 5 BASIC19.07■□□□□ 0.64
SHFQ7M4L6 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
SHFQ7M4L6 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC19.06■□□□□ 0.64
SHFQ7M4L6 KREMEN2-201ENST00000303746 2326 ntAPPRIS P4 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHFQ7M4L6 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC19.06■□□□□ 0.64
SHFQ7M4L6 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHFQ7M4L6 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
SHFQ7M4L6 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.06■□□□□ 0.64
SHFQ7M4L6 PRR16-202ENST00000407149 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHFQ7M4L6 AC092667.1-201ENST00000434301 2586 ntBASIC19.05■□□□□ 0.64
SHFQ7M4L6 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
SHFQ7M4L6 C10orf91-202ENST00000392630 1846 ntTSL 2 BASIC19.05■□□□□ 0.64
SHFQ7M4L6 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHFQ7M4L6 BCKDK-201ENST00000219794 2128 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHFQ7M4L6 GAL3ST3-201ENST00000312006 2133 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHFQ7M4L6 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHFQ7M4L6 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SHFQ7M4L6 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SHFQ7M4L6 AC091982.4-201ENST00000623943 726 ntTSL 2 BASIC19.05■□□□□ 0.64
SHFQ7M4L6 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC19.05■□□□□ 0.64
SHFQ7M4L6 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SHFQ7M4L6 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
SHFQ7M4L6 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
SHFQ7M4L6 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC19.05■□□□□ 0.64
SHFQ7M4L6 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.05■□□□□ 0.64
SHFQ7M4L6 B3GALT4-204ENST00000451237 1694 ntAPPRIS P1 BASIC19.05■□□□□ 0.64
SHFQ7M4L6 FARSA-201ENST00000314606 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 LHPP-202ENST00000368842 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SHFQ7M4L6 FAM3A-202ENST00000359889 1712 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
SHFQ7M4L6 PEMT-202ENST00000395781 1050 ntTSL 2 BASIC19.04■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms