Protein–RNA interactions for Protein: Q71F78

LCA10, Putative lung carcinoma-associated protein 10, humanhuman

Predictions only

Length 164 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCA10Q71F78 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC11.38□□□□□ -0.59
LCA10Q71F78 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC11.38□□□□□ -0.59
LCA10Q71F78 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 NAGPA-202ENST00000381955 2100 ntTSL 5 BASIC11.38□□□□□ -0.59
LCA10Q71F78 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
LCA10Q71F78 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 CSNK1G3-207ENST00000512718 1569 ntTSL 2 BASIC11.37□□□□□ -0.59
LCA10Q71F78 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 ANKRD9-204ENST00000559651 1444 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
LCA10Q71F78 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 GPX1-201ENST00000419349 1106 ntBASIC11.37□□□□□ -0.59
LCA10Q71F78 GNAS-201ENST00000265620 1866 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
LCA10Q71F78 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC11.37□□□□□ -0.59
LCA10Q71F78 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC11.37□□□□□ -0.59
LCA10Q71F78 RHOF-203ENST00000537171 1485 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 OSCAR-207ENST00000391761 1826 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 VDAC2-203ENST00000332211 1557 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 ZNF174-202ENST00000344823 1557 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 HSPBP1-202ENST00000433386 1572 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
LCA10Q71F78 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC11.37□□□□□ -0.59
LCA10Q71F78 SLC35A2-201ENST00000247138 1672 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 RANBP10-201ENST00000317506 5341 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC11.36□□□□□ -0.59
LCA10Q71F78 GATA6-AS1-202ENST00000583490 1788 ntTSL 2 BASIC11.36□□□□□ -0.59
LCA10Q71F78 RANBP10-209ENST00000630626 5305 ntAPPRIS ALT2 TSL 5 BASIC11.36□□□□□ -0.59
LCA10Q71F78 AC098818.2-201ENST00000564925 2320 ntBASIC11.36□□□□□ -0.59
LCA10Q71F78 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC11.36□□□□□ -0.59
LCA10Q71F78 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC11.36□□□□□ -0.59
LCA10Q71F78 TMEM102-202ENST00000396568 1962 ntAPPRIS P1 TSL 2 BASIC11.36□□□□□ -0.59
LCA10Q71F78 AC245041.2-204ENST00000610809 1962 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
LCA10Q71F78 PDSS1-201ENST00000376215 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 PTPA-210ENST00000414510 1153 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 UBE2D2-205ENST00000505548 1113 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 RASGEF1B-211ENST00000514050 537 ntTSL 2 BASIC11.36□□□□□ -0.59
LCA10Q71F78 OPRD1-202ENST00000621425 1217 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 CBWD2-201ENST00000259199 1812 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 LHX3-202ENST00000371748 2365 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC11.36□□□□□ -0.59
LCA10Q71F78 JMJD8-201ENST00000412368 2038 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC11.36□□□□□ -0.59
LCA10Q71F78 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
LCA10Q71F78 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 BX323043.1-201ENST00000641006 1765 ntBASIC11.36□□□□□ -0.59
LCA10Q71F78 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
LCA10Q71F78 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC11.36□□□□□ -0.59
LCA10Q71F78 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LCA10Q71F78 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC11.35□□□□□ -0.59
LCA10Q71F78 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC11.35□□□□□ -0.59
LCA10Q71F78 LIMD2-205ENST00000578402 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LCA10Q71F78 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC11.35□□□□□ -0.59
LCA10Q71F78 MANEAL-203ENST00000397631 2327 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LCA10Q71F78 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC11.35□□□□□ -0.59
LCA10Q71F78 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC11.35□□□□□ -0.59
LCA10Q71F78 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC11.35□□□□□ -0.59
LCA10Q71F78 LINC01006-201ENST00000333319 2292 ntBASIC11.35□□□□□ -0.59
LCA10Q71F78 PHACTR3-202ENST00000359926 2252 ntTSL 2 BASIC11.35□□□□□ -0.59
LCA10Q71F78 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC11.35□□□□□ -0.59
LCA10Q71F78 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC11.35□□□□□ -0.59
LCA10Q71F78 ADARB2-202ENST00000381310 1810 ntTSL 1 (best) BASIC11.35□□□□□ -0.59
LCA10Q71F78 C7orf25-205ENST00000438029 1743 ntAPPRIS P1 TSL 2 BASIC11.35□□□□□ -0.59
LCA10Q71F78 MAP4K4-202ENST00000324219 7526 ntTSL 5 BASIC11.34□□□□□ -0.59
LCA10Q71F78 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC11.34□□□□□ -0.59
LCA10Q71F78 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LCA10Q71F78 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
LCA10Q71F78 NAAA-204ENST00000507187 1750 ntTSL 1 (best) BASIC11.34□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms