Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf139Q6ZV77 AC008175.2-201ENST00000612840 297 ntBASIC17.15■□□□□ 0.34
C9orf139Q6ZV77 DHPS-223ENST00000614126 1124 ntTSL 5 BASIC17.15■□□□□ 0.34
C9orf139Q6ZV77 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf139Q6ZV77 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf139Q6ZV77 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf139Q6ZV77 ADAM22-209ENST00000439864 2576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf139Q6ZV77 AP000547.3-201ENST00000592918 1576 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf139Q6ZV77 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
C9orf139Q6ZV77 FPGS-204ENST00000393706 2230 ntTSL 2 BASIC17.15■□□□□ 0.34
C9orf139Q6ZV77 PNKP-201ENST00000322344 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
C9orf139Q6ZV77 GPIHBP1-201ENST00000622500 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 PHC2-202ENST00000373418 2550 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 VIL1-204ENST00000440053 1454 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 KCNH6-203ENST00000580652 1703 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 CD8B-205ENST00000393761 932 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 BET1L-204ENST00000410108 637 ntTSL 3 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 CD8B-206ENST00000431506 692 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 UQCRFS1P1-201ENST00000435169 820 ntBASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 AC021660.2-201ENST00000502999 388 ntTSL 3 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 PFKL-212ENST00000628044 129 ntTSL 3 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 KRT7-201ENST00000331817 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 ZNF784-201ENST00000325351 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 AC080112.2-201ENST00000578774 2094 ntTSL 4 BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
C9orf139Q6ZV77 AC133561.1-201ENST00000568600 2415 ntBASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 MMP24-201ENST00000246186 4414 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 SMAGP-205ENST00000603864 1518 ntAPPRIS P1 TSL 2 BASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 RGMA-211ENST00000557420 989 ntTSL 3 BASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC17.13■□□□□ 0.33
C9orf139Q6ZV77 NAA10-208ENST00000464845 1772 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 AC139530.1-201ENST00000575312 1977 ntBASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 DHRS4-202ENST00000397074 785 ntTSL 5 BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 APTR-205ENST00000447009 902 ntTSL 2 BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 NCAPD3-204ENST00000526422 1060 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 ULK4P1-204ENST00000565949 721 ntTSL 4 BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 AC105036.2-201ENST00000569468 176 ntBASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 COG8-201ENST00000562081 1731 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 RABEP2-201ENST00000357573 2175 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
C9orf139Q6ZV77 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 KPTN-201ENST00000338134 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 ALG1L9P-201ENST00000508969 2165 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 ABHD17AP1-201ENST00000358206 933 ntBASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 AC018553.2-201ENST00000637770 1064 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 ST3GAL5-268ENST00000640982 2465 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 KRT16P2-201ENST00000414673 1423 ntBASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 AC068338.2-201ENST00000563278 1430 ntBASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
C9orf139Q6ZV77 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 ME2-208ENST00000638937 2471 ntTSL 5 BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 TMEM51-203ENST00000400796 1842 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 TANGO2-202ENST00000398042 2011 ntTSL 2 BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 NOXO1-203ENST00000397280 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 CYP2T1P-201ENST00000432607 1285 ntBASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 AC069152.1-201ENST00000438030 544 ntBASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 UMAD1-202ENST00000463725 559 ntTSL 4 BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 CD99P1-205ENST00000527459 561 ntBASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 PSMC3IP-208ENST00000590760 664 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
C9orf139Q6ZV77 OR10C1-204ENST00000622521 1039 ntBASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms