Protein–RNA interactions for Protein: Q6P9H4

CNKSR3, Connector enhancer of kinase suppressor of ras 3, humanhuman

Predictions only

Length 555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3Q6P9H4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC23.04■■□□□ 1.28
CNKSR3Q6P9H4 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR3Q6P9H4 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR3Q6P9H4 TLE3-216ENST00000559191 1575 ntTSL 5 BASIC23.03■■□□□ 1.28
CNKSR3Q6P9H4 SERPINH1P1-201ENST00000419794 1249 ntBASIC23.03■■□□□ 1.28
CNKSR3Q6P9H4 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC23.03■■□□□ 1.28
CNKSR3Q6P9H4 HAGLR-207ENST00000452365 661 ntTSL 4 BASIC23.03■■□□□ 1.28
CNKSR3Q6P9H4 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC23.03■■□□□ 1.28
CNKSR3Q6P9H4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CNKSR3Q6P9H4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 HLA-DPB1-211ENST00000418931 1560 ntAPPRIS P2 BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 OR2A1-AS1-201ENST00000462305 773 ntBASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 TANGO2-210ENST00000432883 2084 ntTSL 2 BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CNKSR3Q6P9H4 IGFBP1-203ENST00000468955 1369 ntTSL 5 BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 FASTK-212ENST00000482571 1764 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 CCS-208ENST00000533244 1430 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 KRTAP5-8-201ENST00000398534 1183 ntAPPRIS P1 BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 AC026366.1-201ENST00000488803 879 ntBASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 UNC93B5-201ENST00000530315 699 ntBASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 PLK5-204ENST00000588430 900 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 APOC3-205ENST00000630701 541 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 RASGRP2-207ENST00000377497 2221 ntAPPRIS P2 TSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC23.01■■□□□ 1.27
CNKSR3Q6P9H4 IGFBP1-202ENST00000457280 1601 ntAPPRIS ALT2 TSL 5 BASIC23■■□□□ 1.27
CNKSR3Q6P9H4 NOCT-201ENST00000280614 1952 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNKSR3Q6P9H4 RCN2-201ENST00000320963 1750 ntTSL 5 BASIC23■■□□□ 1.27
CNKSR3Q6P9H4 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNKSR3Q6P9H4 AC006252.1-201ENST00000483834 1101 ntTSL 1 (best) BASIC23■■□□□ 1.27
CNKSR3Q6P9H4 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC23■■□□□ 1.27
CNKSR3Q6P9H4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC23■■□□□ 1.27
CNKSR3Q6P9H4 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CNKSR3Q6P9H4 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC23■■□□□ 1.27
CNKSR3Q6P9H4 AC137767.1-201ENST00000602918 1920 ntBASIC23■■□□□ 1.27
CNKSR3Q6P9H4 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR3Q6P9H4 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR3Q6P9H4 LGALS9B-201ENST00000324290 1243 ntAPPRIS P2 TSL 5 BASIC22.99■■□□□ 1.27
CNKSR3Q6P9H4 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR3Q6P9H4 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR3Q6P9H4 CD44-222ENST00000526025 1052 ntTSL 2 BASIC22.99■■□□□ 1.27
CNKSR3Q6P9H4 HAUS4-201ENST00000206474 1642 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
CNKSR3Q6P9H4 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC22.99■■□□□ 1.27
CNKSR3Q6P9H4 MAN2C1-244ENST00000618257 1346 ntTSL 5 BASIC22.99■■□□□ 1.27
CNKSR3Q6P9H4 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC22.99■■□□□ 1.27
CNKSR3Q6P9H4 DUSP26-201ENST00000256261 1835 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 P2RX2-201ENST00000343948 1494 ntAPPRIS P4 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 PTX4-203ENST00000447419 1516 ntAPPRIS ALT2 TSL 5 BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 ANKRD39-201ENST00000393537 976 ntAPPRIS P1 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 LSM12P1-201ENST00000411836 588 ntBASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 AL596275.1-201ENST00000423464 877 ntBASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 RPS2P4-201ENST00000476944 856 ntBASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 AC092143.2-201ENST00000554623 985 ntTSL 3 BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 AC016588.1-201ENST00000591533 542 ntTSL 4 BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 RARG-204ENST00000543726 1779 ntTSL 2 BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.98■■□□□ 1.27
CNKSR3Q6P9H4 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 SMUG1-202ENST00000337581 1571 ntAPPRIS P1 TSL 2 BASIC22.97■■□□□ 1.27
CNKSR3Q6P9H4 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC22.97■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 19.1 ms