Protein–RNA interactions for Protein: Q6NXT2

H3F3C, Histone H3.3C, humanhuman

Predictions only

Length 135 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H3F3CQ6NXT2 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 AC092053.2-201ENST00000640557 1818 ntBASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 CITED1-201ENST00000246139 1231 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 DTYMK-201ENST00000305784 1232 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 NCF1B-203ENST00000435988 1254 ntBASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 RNF146-206ENST00000480444 843 ntTSL 2 BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 AC037459.4-201ENST00000517384 585 ntTSL 4 BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 GXYLT1P5-201ENST00000614548 1189 ntBASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 AL161421.1-201ENST00000619666 1101 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 MEIS3-212ENST00000561293 1918 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
H3F3CQ6NXT2 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 NFKBIL1-203ENST00000376148 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 CASTOR1-201ENST00000404953 1460 ntTSL 5 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 CD58-203ENST00000457047 1328 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 TMEM179B-205ENST00000533861 797 ntTSL 5 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 BRI3-207ENST00000539286 699 ntTSL 2 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 FP565260.3-201ENST00000612610 1162 ntAPPRIS P5 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 HEXB-201ENST00000261416 1901 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 C1orf229-201ENST00000623686 2258 ntBASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 BFSP1-202ENST00000377873 2207 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 ST7L-201ENST00000343210 1866 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
H3F3CQ6NXT2 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 NAA20-201ENST00000310450 920 ntTSL 2 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 KANSL1-AS1-201ENST00000398275 517 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 AC006970.2-201ENST00000450065 779 ntBASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 HAGH-203ENST00000455446 1276 ntTSL 2 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 SCN1B-203ENST00000595652 814 ntTSL 2 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 CAMKK2-208ENST00000412367 2006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 C19orf68-201ENST00000328759 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 PGF-201ENST00000238607 1693 ntAPPRIS ALT2 TSL 3 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 SH2D5-202ENST00000444387 1934 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
H3F3CQ6NXT2 B4GALNT1-202ENST00000418555 1861 ntTSL 2 BASIC19.58■□□□□ 0.73
H3F3CQ6NXT2 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H3F3CQ6NXT2 HLA-C-203ENST00000383329 1554 ntAPPRIS ALT2 BASIC19.58■□□□□ 0.73
H3F3CQ6NXT2 YBX1-201ENST00000321358 1514 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
H3F3CQ6NXT2 MIR210HG-201ENST00000500447 1965 ntTSL 2 BASIC19.58■□□□□ 0.73
H3F3CQ6NXT2 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
H3F3CQ6NXT2 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 AC010536.3-201ENST00000620306 533 ntBASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 TUSC3-203ENST00000503731 1498 ntAPPRIS P4 TSL 1 (best) BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 ZNF37BP-201ENST00000435805 1695 ntTSL 5 BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC19.58■□□□□ 0.72
H3F3CQ6NXT2 LYPLA1-201ENST00000316963 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 TPD52L1-203ENST00000368402 1308 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 RNF180-201ENST00000296615 1727 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 AC007322.1-201ENST00000426983 750 ntBASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 ARF3-202ENST00000447318 1089 ntTSL 2 BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 MAZ-216ENST00000616501 991 ntTSL 5 BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 PDK3-201ENST00000379162 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
H3F3CQ6NXT2 LTB4R-201ENST00000345363 1616 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms