Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PPP4R3AQ6IN85 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.11■■□□□ 1.45
PPP4R3AQ6IN85 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PPP4R3AQ6IN85 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PPP4R3AQ6IN85 EEF1DP3-203ENST00000566025 782 ntBASIC24.11■■□□□ 1.45
PPP4R3AQ6IN85 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.11■■□□□ 1.45
PPP4R3AQ6IN85 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC24.11■■□□□ 1.45
PPP4R3AQ6IN85 FAHD1-202ENST00000382668 1845 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PPP4R3AQ6IN85 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC24.11■■□□□ 1.45
PPP4R3AQ6IN85 SLC2A11-202ENST00000316185 1555 ntTSL 1 (best) BASIC24.11■■□□□ 1.45
PPP4R3AQ6IN85 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 EPO-201ENST00000252723 1330 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 CENPS-CORT-201ENST00000400900 1469 ntTSL 2 BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 AP004607.4-201ENST00000530158 1459 ntBASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 ME2-206ENST00000638410 2289 ntTSL 5 BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 ME2-210ENST00000639255 2262 ntTSL 5 BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 SCRN2-212ENST00000584123 1745 ntTSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 NOC4L-201ENST00000330579 1632 ntAPPRIS P1 TSL 1 (best) BASIC24.1■■□□□ 1.45
PPP4R3AQ6IN85 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 ILDR2-205ENST00000526687 2299 ntTSL 5 BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 TTYH1-203ENST00000376531 1763 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 TCTEX1D4-201ENST00000339355 763 ntAPPRIS P1 BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 GUK1-207ENST00000366726 873 ntAPPRIS P3 TSL 3 BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 GABARAPL2-205ENST00000568455 646 ntTSL 3 BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 AC104564.3-201ENST00000582367 638 ntBASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 ZSCAN18-217ENST00000601144 2190 ntAPPRIS P3 TSL 1 (best) BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 HERC2P8-204ENST00000567073 1988 ntTSL 5 BASIC24.09■■□□□ 1.45
PPP4R3AQ6IN85 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 DHRS2-202ENST00000344777 1678 ntAPPRIS ALT2 TSL 1 (best) BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 HSD11B1L-201ENST00000301382 1457 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 PDIA6-207ENST00000540494 2509 ntAPPRIS ALT1 TSL 2 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 COX20-201ENST00000366528 568 ntTSL 2 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 KLRG2-202ENST00000393039 1148 ntTSL 5 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 KRT18P61-201ENST00000585825 1298 ntBASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 AC053503.5-201ENST00000601508 636 ntBASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.08■■□□□ 1.45
PPP4R3AQ6IN85 SH2D3A-201ENST00000245908 2296 ntAPPRIS P1 TSL 1 (best) BASIC24.08■■□□□ 1.44
PPP4R3AQ6IN85 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC24.08■■□□□ 1.44
PPP4R3AQ6IN85 COMMD5-207ENST00000543949 1571 ntAPPRIS P1 TSL 3 BASIC24.08■■□□□ 1.44
PPP4R3AQ6IN85 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 TPST1-201ENST00000304842 2116 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 SKIDA1-201ENST00000444772 2667 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 ATPIF1-204ENST00000497986 599 ntTSL 2 BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 TRAPPC2L-213ENST00000567895 854 ntTSL 3 BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 TERF1-202ENST00000276603 1677 ntAPPRIS P4 TSL 1 (best) BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 AC004854.2-201ENST00000608450 1441 ntBASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 POTEC-204ENST00000620346 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 MME-202ENST00000382989 1319 ntTSL 1 (best) BASIC24.07■■□□□ 1.44
PPP4R3AQ6IN85 CSNK1G3-206ENST00000511130 1356 ntTSL 2 BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 VPS29-206ENST00000549578 1523 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 ANKRD20A6P-201ENST00000618763 204 ntBASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 AL133516.1-201ENST00000633012 540 ntTSL 5 BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 LINC00565-201ENST00000562710 2331 ntBASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC24.06■■□□□ 1.44
PPP4R3AQ6IN85 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 MFSD3-201ENST00000301327 1548 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 HSF2BP-201ENST00000291560 1899 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
PPP4R3AQ6IN85 ASCL2-201ENST00000331289 1852 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
Retrieved 100 of 98,524 protein–RNA pairs in 19.2 ms